ID V7BPN5_PHAVU Unreviewed; 611 AA.
AC V7BPN5;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=PHAVU_006G167300g {ECO:0000313|EMBL:ESW19934.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW19934.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; CM002293; ESW19934.1; -; Genomic_DNA.
DR RefSeq; XP_007147940.1; XM_007147878.1.
DR AlphaFoldDB; V7BPN5; -.
DR EnsemblPlants; ESW19934; ESW19934; PHAVU_006G167300g.
DR GeneID; 18629037; -.
DR Gramene; ESW19934; ESW19934; PHAVU_006G167300g.
DR KEGG; pvu:PHAVU_006G167300g; -.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; EPKHCGD; -.
DR OrthoDB; 1208472at2759; -.
DR Proteomes; UP000000226; Chromosome 6.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR24015:SF1832; OS03G0241800 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 4.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 102..136
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 203..237
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 273..303
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 304..338
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 519..611
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 611 AA; 68925 MW; BEFF92DD5433362E CRC64;
MSVCSKLCSL VQSHPSMFHA TNFLSTTPQN PLPYYLLTKC IVLLQSSASS KYKLRQIHAF
SIRHGVSLHN PDMAKHLIFT IVSLSAPMSY AYNVFTRIHN PNVFTWNTMI RGYAESQNPS
PALHFYRQMT VSCVEPDTHT YPFLLKAISK SLNVREGEAI HSVTIRNGFQ SLVFVQNSLL
HIYAACGYTE SAYKVFELMK ERDLVAWNSV INGFALNGRP NEALTLFREM SVEGVEPDGF
TVVSLLSACA ELGALELGRR VHVYLLKVGL RENSYVTNSL LDLYAKCGTI REAQQVFGEM
SERNAVSWTS LIVGLAVNGF GEEALELFKE MEGQGLVPSE ITFVGVLYAC SHCGMLDEGF
NYFKRMEEEY GILPRIEHYG CMVDLLSRAG LVKQAYKYIQ NMPVQPNAVI WRTLLGACTI
HGHLDLGEIA RSHILKLEPK HSGDYVLLSN LYASERRWSD VQVVRRSMLK DGVKKTPGYS
LVELGNRVYE FTIGDRSHPQ SQDVYALLEK ITELLKLEGY VPLTANVLAD IEEEEKEQAL
CYHSEKLAIA FMLLNTAPAA PIRVVKNLRV CADCHVAIKL ISKIYDREIV IRDRSRFHHF
RGGSCSCKDY W
//
