ID V7C818_PHAVU Unreviewed; 580 AA.
AC V7C818;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 13-SEP-2023, entry version 39.
DE RecName: Full=PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303};
GN ORFNames=PHAVU_003G108600g {ECO:0000313|EMBL:ESW26312.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW26312.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
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DR EMBL; CM002290; ESW26312.1; -; Genomic_DNA.
DR RefSeq; XP_007154318.1; XM_007154256.1.
DR AlphaFoldDB; V7C818; -.
DR EnsemblPlants; ESW26312; ESW26312; PHAVU_003G108600g.
DR GeneID; 18634541; -.
DR Gramene; ESW26312; ESW26312; PHAVU_003G108600g.
DR KEGG; pvu:PHAVU_003G108600g; -.
DR OrthoDB; 5479527at2759; -.
DR Proteomes; UP000000226; Chromosome 3.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR012959; CPL_dom.
DR InterPro; IPR033133; PUM-HD.
DR InterPro; IPR040059; PUM3.
DR InterPro; IPR001313; Pumilio_RNA-bd_rpt.
DR PANTHER; PTHR13389:SF0; PUMILIO HOMOLOG 3; 1.
DR PANTHER; PTHR13389; UNCHARACTERIZED; 1.
DR Pfam; PF08144; CPL; 1.
DR Pfam; PF00806; PUF; 2.
DR SMART; SM00025; Pumilio; 5.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR PROSITE; PS50302; PUM; 3.
DR PROSITE; PS50303; PUM_HD; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT DOMAIN 27..379
FT /note="PUM-HD"
FT /evidence="ECO:0000259|PROSITE:PS50303"
FT REPEAT 55..90
FT /note="Pumilio"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00317"
FT REPEAT 91..126
FT /note="Pumilio"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00317"
FT REPEAT 127..163
FT /note="Pumilio"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00317"
FT REGION 362..411
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 362..378
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 379..411
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 580 AA; 65264 MW; 75C872D3CED56CF7 CRC64;
MPRFLFFIEL ADARKKKRRR HYTLEQELAR LWEKMRRHEI AKEDRAKLVT EALQKMKGKI
SEIVGSHISS RVLQTCVKHC SQAERDTVFE ELSPHFLNLA YNAYAVHLVK KMLDNASKKQ
LAGFISTLHG HVAPLLRHMV GSVVVEHAYE LANAAQKQEL LLELYSTELQ LFKDLVSLKE
SRLLDVMSKL KLQKGSVLRH MTSVIQPILE KGIVDHSILH RVLLEYFSIA DKSSVTDIIQ
QLSSPLIVRM IGTRDGAKIG ILCVKYGNAK ERKKIIKGLK GHVDKTAYHQ YGCMVLVCIL
SVVDDTKLIT KEIIRGFQSV LKELVLDKNG RRPLLQLLHP NSSRYFSPDD LATLSLSIPS
LSPKDQSGES SLTETIKVSL GDEESKEDMA VDEVNKDKTS VDDSDLAESG KKDPLVRRQE
LLIKSGLADS LLDVCIESVE ELLRSNFGKE ILYEVATGGS DGIMLPTLDD KINSLHNAVA
SLAAMPKPAD SQEEHVLENF HSSRTIRKLI LDCPNFASTL WEKAFKGKSE LWAHGHSCKI
VSAFLESPDL KVQKLVKKEL QPLIDRGILK NPKHKEQESQ
//
