ID V7CTA9_PHAVU Unreviewed; 691 AA.
AC V7CTA9;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=PHAVU_002G328000g {ECO:0000313|EMBL:ESW32505.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW32505.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; CM002289; ESW32505.1; -; Genomic_DNA.
DR RefSeq; XP_007160511.1; XM_007160449.1.
DR AlphaFoldDB; V7CTA9; -.
DR EnsemblPlants; ESW32505; ESW32505; PHAVU_002G328000g.
DR GeneID; 18639847; -.
DR Gramene; ESW32505; ESW32505; PHAVU_002G328000g.
DR KEGG; pvu:PHAVU_002G328000g; -.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; HYEEAMN; -.
DR OrthoDB; 464681at2759; -.
DR Proteomes; UP000000226; Chromosome 2.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 11.
DR PANTHER; PTHR24015:SF739; OS03G0644200 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 9.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS51375; PPR; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 35..65
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 66..100
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 159..189
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 190..224
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 252..286
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 384..418
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 599..691
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 691 AA; 78824 MW; A4C775A87DD8B021 CRC64;
MPLRNYVSYN AMLSGYLRNA EFSLARNLFD RMPKDLFSWN LMLSGYVRNR RLRDARVLFD
SMPQKDVVSW NAMLSGYVRS GHVDEAREVF DKMPHKNSIS WNGLLAAYVR SGRLEEGSLL
FESKSDWELI SWNCLMGGYV KRSMLGDARL LFDQMPIRDV VSWNTMISGY AQDGDLSQAR
RLFEESPVRD VFTWTAMVCA YVQNGMLDEA RRVFNEMPQR REMSYNAMIA GYVQYKRMDM
ARELFEEMPF PNIGSWNIMI SCYCQEGDVA QARNLFDRMP QRDSVSWAAI IAGYAQNGHY
EEAMNMLVEM KRDGEGLNRS TLCCALSTCA HIAALELGKQ VHGQVVKTGY ENGCLVGNAL
VGMYCKCGCI DEAYEVFQGI QRKDIVSWNT MLSGYARHGF GRLALTVFES MITAGVKPDE
ITMVGVLSAC SHNGLTDRGT EYFHSMDKDY GVKPNSNHYT CTVDLLGRAG RLEEAQNLIR
NMPFEPDVAT WGALLGASRI HGNMELSEKA AEMIFKMEPH NSGMYVLLSN LYAASGRWVD
VSKIRLKMRE VGVQKTPGYS WVEVHNKIHT FTVGDCFHPE KRRIYAFLEE LDLEMKQEGY
VPSTKLVLHD VEEEEKKHML KYHSEKIAVA FGILTIPAGR PIRVMKNLRV CEDCHNAIKH
ISKIVGRLII LRDSHRFHHF SEGICSCGDY W
//
