ID   V9FEQ0_PHYPR            Unreviewed;      1194 AA.
AC   V9FEQ0;
DT   19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT   19-FEB-2014, sequence version 1.
DT   24-JAN-2024, entry version 31.
DE   RecName: Full=tRNA ligase phosphodiesterase domain-containing protein {ECO:0000259|Pfam:PF08302};
GN   ORFNames=F443_07137 {ECO:0000313|EMBL:ETI48882.1};
OS   Phytophthora parasitica P1569.
OC   Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC   Phytophthora.
OX   NCBI_TaxID=1317065 {ECO:0000313|EMBL:ETI48882.1, ECO:0000313|Proteomes:UP000018721};
RN   [1] {ECO:0000313|EMBL:ETI48882.1, ECO:0000313|Proteomes:UP000018721}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=P1569 {ECO:0000313|EMBL:ETI48882.1,
RC   ECO:0000313|Proteomes:UP000018721};
RG   The Broad Institute Genomics Platform;
RA   Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA   Machado M., Johnson C.S., Arredondo F., Hong C., Coffey M., Young S.K.,
RA   Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L.,
RA   Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA   Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA   Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA   Wortman J., Nusbaum C., Birren B.;
RT   "The Genome Sequence of Phytophthora parasitica P1569.";
RL   Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ETI48882.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; ANIZ01001186; ETI48882.1; -; Genomic_DNA.
DR   AlphaFoldDB; V9FEQ0; -.
DR   EnsemblProtists; ETI48882; ETI48882; F443_07137.
DR   eggNOG; KOG2401; Eukaryota.
DR   HOGENOM; CLU_271540_0_0_1; -.
DR   OrthoDB; 5489998at2759; -.
DR   Proteomes; UP000018721; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003972; F:RNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   InterPro; IPR026302; NEDD4_b_p2.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR015965; tRNA_lig_PDEase.
DR   PANTHER; PTHR13308:SF40; SMR DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR13308; UNCHARACTERIZED; 1.
DR   Pfam; PF13671; AAA_33; 1.
DR   Pfam; PF08302; tRNA_lig_CPD; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000018721}.
FT   DOMAIN          492..552
FT                   /note="tRNA ligase phosphodiesterase"
FT                   /evidence="ECO:0000259|Pfam:PF08302"
FT   REGION          1..35
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        7..22
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1194 AA;  132976 MW;  8EF96F5DEDEA510D CRC64;
     MAWGKNRRAS SGNSSSRPSS SAGRGGRRPP GEPTEQDIAR NIQRSAVRVR VLLTLSDVQD
     ESELLRDLLT AFEQNLEAQR DNGVTQRHRV RVELLECGLN SWQNLVELQR VLAGLKRPIE
     YGEEQQLMAK TTLRHDSKYD EWTLSLGFTR ASEDALWRFA SNLMLRLKSC GVPSKVLLST
     HRLVVRLASA FVEWGNLEIG KYQWEGKQAW SQLVVEVPGE EREEIQRVFL PPLSDVARDP
     LTELRYPELV PVVDDMLSSK DTGKPVVVIL RGIPGSGKST LGREIEAICH HRGVALTACS
     ADFFFETPRG YVFDVRKLGA AHSKCKGDFT RAVQGGIPRN ISDRSYHQHV VLVDNTSTQR
     WEYEPYEDIA KSHGSRVHIV EMKCADALMA FRMGQRNSHG VPPDKVVSMF MRWEDDARAH
     CFTPQFEHAR LTANPLSDGD VGGLTYLGLF LNDDTQQKML SQIPLVHPNR LADHVTLFYR
     PNKQYTRNAE LGAPFTVRAI EVVQDDQAQT LRVELDERLP LQVRNKIPHI TMSTKDGVSA
     SYSNDLLESK SAKRTMLNPP IEFTMRLGAA LVIQNQRVIT TSSPFAVDTS CCSKKEMSTP
     NTNGDKEDKV ASATSRLFVL YVNEGDMLQD SEEDATKLLW RVQIMHHMGS SCKVRGLLCV
     QRYEESSSAS VATTLSSIQD HFLFSSTLYF DDVIMLPQHP SFPGFEKAIS SYVAAAGVGL
     VNHLTLMTSV EESIQWPICE MESLHEASLN VVRFGHATQS ISALPPTCQT ILSALDLLGS
     NIQEEVRSAI LGGVNAVNDA WVCVLGAEDR QAVQRIDTTI PGLSSSVVEL YLMLPSGTAA
     SEVEVLKTKL LSVLEATPNV HRMLRSCTSD QFYFNMCSLS SYTPHFCVQM ARQQEESDNP
     VTNTAAQLKF CEHQLKMSHE ACDVEAYSVL VALLRAILLG RCSNDLPTKC RLSTLINLVS
     ERLVLHYVSS IDDVNPTADD VTSGRIITTL YSMLTYLSKL DPAEWAATFG DSILALQGNE
     KARAAWREAM DTLMQSCAAV MTSHCCVSDD SKSATQLNPN DHLRVVVALM KTDNMRVHEI
     RTRTYIEMSS RSAWSPLHSL ACCDKLRSVA AMVVPQDDDE HNGDSEFFSC APSLVARRVD
     VATSSLDLLR NVLEKLHALE ATEWRDSEGA LSGDYVIRRA ETDEEVLIDL KRSS
//