ID W0F4N7_9BACT Unreviewed; 320 AA.
AC W0F4N7;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=DNA-binding protein {ECO:0000313|EMBL:AHF16758.1};
GN ORFNames=NIASO_19400 {ECO:0000313|EMBL:AHF16758.1};
OS Niabella soli DSM 19437.
OC Bacteria; Bacteroidota; Chitinophagia; Chitinophagales; Chitinophagaceae;
OC Niabella.
OX NCBI_TaxID=929713 {ECO:0000313|EMBL:AHF16758.1, ECO:0000313|Proteomes:UP000003586};
RN [1] {ECO:0000313|EMBL:AHF16758.1, ECO:0000313|Proteomes:UP000003586}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 19437 {ECO:0000313|Proteomes:UP000003586};
RG DOE Joint Genome Institute;
RA Eisen J., Huntemann M., Han J., Chen A., Kyrpides N., Mavromatis K.,
RA Markowitz V., Palaniappan K., Ivanova N., Schaumberg A., Pati A.,
RA Liolios K., Nordberg H.P., Cantor M.N., Hua S.X., Woyke T.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP007035; AHF16758.1; -; Genomic_DNA.
DR RefSeq; WP_008588343.1; NZ_CP007035.1.
DR AlphaFoldDB; W0F4N7; -.
DR STRING; 929713.NIASO_19400; -.
DR KEGG; nso:NIASO_19400; -.
DR eggNOG; COG2378; Bacteria.
DR HOGENOM; CLU_041141_5_1_10; -.
DR OrthoDB; 9815009at2; -.
DR Proteomes; UP000003586; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR001034; DeoR_HTH.
DR InterPro; IPR013196; HTH_11.
DR InterPro; IPR028349; PafC.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR026881; WYL_dom.
DR PANTHER; PTHR34580; -; 1.
DR PANTHER; PTHR34580:SF3; REGULATORY PROTEIN-RELATED; 1.
DR Pfam; PF08279; HTH_11; 1.
DR Pfam; PF13280; WYL; 1.
DR PIRSF; PIRSF016838; PafC; 2.
DR SMART; SM00420; HTH_DEOR; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51000; HTH_DEOR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:AHF16758.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000003586};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 8..63
FT /note="HTH deoR-type"
FT /evidence="ECO:0000259|PROSITE:PS51000"
SQ SEQUENCE 320 AA; 37378 MW; C5DB4CD85C8F1174 CRC64;
MATEPINKFD RIVSILIQLQ SKRIVKAQDL ADRFDVSLRT IYRDIRSLQT AGVPISSEAG
VGYELVEGYR LPPVMFTREE ASSFVAAEKL MQKFIDKRLR DHFVAAITKM KAVLRMAEKD
WISSIESQVL VRGGQHIFNE KVPEALSVLF DSLAQKVQLE ISYKKLESDK AEKRQIEPVG
VFHENNFWYL MAWCHLRSDY RQFRTDRIQA IRKLDSAFTK EHPELEHFLT QPKDGPRTKV
RIVVDLQIAR YLDRQKEHHG FVAQENTPEG IEMTFMCRYA ENDFARWFLT FGDYAKILEP
ETVKQAVREI LAKQLEHIDR
//
