ID W0HYB8_9GAMM Unreviewed; 193 AA.
AC W0HYB8;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Putative biofilm operon IcaABCD HTH-type negative transcriptional regulator {ECO:0000313|EMBL:AHF77143.1};
GN Name=icaR {ECO:0000313|EMBL:AHF77143.1};
GN ORFNames=Sant_2095 {ECO:0000313|EMBL:AHF77143.1};
OS Sodalis praecaptivus.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Bruguierivoracaceae; Sodalis.
OX NCBI_TaxID=1239307 {ECO:0000313|EMBL:AHF77143.1, ECO:0000313|Proteomes:UP000019028};
RN [1] {ECO:0000313|EMBL:AHF77143.1, ECO:0000313|Proteomes:UP000019028}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HS1 {ECO:0000313|EMBL:AHF77143.1,
RC ECO:0000313|Proteomes:UP000019028};
RX PubMed=24407854; DOI=10.1093/gbe/evt210;
RA Oakeson K.F., Gil R., Clayton A.L., Dunn D.M., von Niederhausern A.C.,
RA Hamil C., Aoyagi A., Duval B., Baca A., Silva F.J., Vallier A.,
RA Jackson D.G., Latorre A., Weiss R.B., Heddi A., Moya A., Dale C.;
RT "Genome degeneration and adaptation in a nascent stage of symbiosis.";
RL Genome Biol. Evol. 6:76-93(2014).
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DR EMBL; CP006569; AHF77143.1; -; Genomic_DNA.
DR RefSeq; WP_025422275.1; NZ_CP006569.1.
DR AlphaFoldDB; W0HYB8; -.
DR KEGG; sod:Sant_2095; -.
DR PATRIC; fig|1239307.3.peg.2317; -.
DR HOGENOM; CLU_069356_15_12_6; -.
DR OrthoDB; 5816932at2; -.
DR Proteomes; UP000019028; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.357.10; Tetracycline Repressor, domain 2; 1.
DR InterPro; IPR023772; DNA-bd_HTH_TetR-type_CS.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001647; HTH_TetR.
DR PANTHER; PTHR30055; HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR; 1.
DR PANTHER; PTHR30055:SF164; TRANSCRIPTIONAL REPRESSOR MCE3R; 1.
DR Pfam; PF00440; TetR_N; 1.
DR PRINTS; PR00455; HTHTETR.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS01081; HTH_TETR_1; 1.
DR PROSITE; PS50977; HTH_TETR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00335};
KW Reference proteome {ECO:0000313|Proteomes:UP000019028}.
FT DOMAIN 11..71
FT /note="HTH tetR-type"
FT /evidence="ECO:0000259|PROSITE:PS50977"
FT DNA_BIND 34..53
FT /note="H-T-H motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00335"
SQ SEQUENCE 193 AA; 21595 MW; C6E8E1077DF72B03 CRC64;
MRKGAGEDFH RQRRAQIIEA AKESFAQSGF HGATMAELSQ QSGLSAGQLY RYFDSKDALI
DAVVRQVAGQ WYRLLAEKLR ALTDYAAILF PQSPFWSDWP ARERVLLLET FSEASRSATL
QSILRQEEQD LIDALVNHDA PPTSLQDESR RRAAIELLLT LINGAVCRTF HEEDIDSAIT
AAVTRFLSAA VRA
//
