ID W1NJJ1_AMBTC Unreviewed; 698 AA.
AC W1NJJ1;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE RecName: Full=Glycosyl hydrolase family 13 catalytic domain-containing protein {ECO:0000259|SMART:SM00642};
GN ORFNames=AMTR_s00008p00166810 {ECO:0000313|EMBL:ERM95340.1};
OS Amborella trichopoda.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX NCBI_TaxID=13333 {ECO:0000313|EMBL:ERM95340.1, ECO:0000313|Proteomes:UP000017836};
RN [1] {ECO:0000313|Proteomes:UP000017836}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24357323;
RG Amborella Genome Project;
RT "The Amborella genome and the evolution of flowering plants.";
RL Science 342:1241089-1241089(2013).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast
CC {ECO:0000256|ARBA:ARBA00004229}.
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DR EMBL; KI397486; ERM95340.1; -; Genomic_DNA.
DR AlphaFoldDB; W1NJJ1; -.
DR STRING; 13333.W1NJJ1; -.
DR EnsemblPlants; ERM95340; ERM95340; AMTR_s00008p00166810.
DR Gramene; ERM95340; ERM95340; AMTR_s00008p00166810.
DR eggNOG; KOG0470; Eukaryota.
DR HOGENOM; CLU_011725_2_1_1; -.
DR OMA; HNNSWNH; -.
DR Proteomes; UP000017836; Unassembled WGS sequence.
DR GO; GO:0009569; C:chloroplast starch grain; IEA:EnsemblPlants.
DR GO; GO:0019156; F:isoamylase activity; IEA:EnsemblPlants.
DR GO; GO:0005983; P:starch catabolic process; IEA:EnsemblPlants.
DR CDD; cd11326; AmyAc_Glg_debranch; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR048650; ISOA1-3-like_C.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF3; ISOAMYLASE 3, CHLOROPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02922; CBM_48; 1.
DR Pfam; PF21156; ISOA1-3_C; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 4: Predicted;
KW Chloroplast {ECO:0000256|ARBA:ARBA00022528};
KW Plastid {ECO:0000256|ARBA:ARBA00022640};
KW Reference proteome {ECO:0000313|Proteomes:UP000017836};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT DOMAIN 169..587
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 698 AA; 79437 MW; EDEE15905BFC4C4E CRC64;
MTEVLEISPT LKSSPGKPSP LGVSETENGI NFAIFSQHAS SVTLSLSLPE GYFEQLEQDT
VIVEINLDPH VNKSGDIWHI CVEDLPRYGV LYGYRVGGPH GWQQGHRFDS NIILLDPYAK
LVEGRRVFAD SSNKMSKFLG TYDFNCLPFD WGSDYKLPNI PEKDLVIYEM NVRAFTADVS
SELDPNLRGS YLGVIEKIPH LLELGINAVE LLPVFEFDEF ELQRHPNARD HMVNTWGYST
LNFFAPMSRY ASSGRGPLAA SIEFKQMVKA LHAAGIEVIL DVVYNHTNEA DDKIPYTTSF
RGIDNKVYYM LDLNNSNQFL NFSGCGNTLN CNHPVVMELI LDSLRHWVME YHVDGFRFDL
ASVLCRGTDG SPLNAPPLVK GIAKDAVLSR CKIIAEPWDC GGLYLVGRFP NWDRWAEWNG
KYRDDVRRFI KGDYGTKGSF ATRIAGSADL YQVNKRKPYH SMNFIIAHDG FTLYDLVAYN
FKHNDANGEG GQDGSNDNFS WNCGVEGETD DPELQSLRSR QMKNFHLALM ISQGTPMILM
GDEYGHTRYG NNNSYGHDTS INHFQWGQLQ EKRKDHFRFF SEIIKFRRRN PLLGREKFLD
KSDITWHENN WDNYNSKFLA FTLHDSKLRS DIYLAFNAHN YFVNAVMPPP PLGRKWFRVI
DTNLLSPDDF VQDGVTGIKD AYNVAPYSSI LLEAKQSS
//
