ID W1PI49_AMBTC Unreviewed; 510 AA.
AC W1PI49;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 46.
DE RecName: Full=Autophagy-related protein 16 domain-containing protein {ECO:0000259|Pfam:PF08614};
GN ORFNames=AMTR_s00019p00218240 {ECO:0000313|EMBL:ERN07301.1};
OS Amborella trichopoda.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX NCBI_TaxID=13333 {ECO:0000313|EMBL:ERN07301.1, ECO:0000313|Proteomes:UP000017836};
RN [1] {ECO:0000313|Proteomes:UP000017836}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24357323;
RG Amborella Genome Project;
RT "The Amborella genome and the evolution of flowering plants.";
RL Science 342:1241089-1241089(2013).
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DR EMBL; KI393807; ERN07301.1; -; Genomic_DNA.
DR RefSeq; XP_006845626.1; XM_006845563.2.
DR RefSeq; XP_011623833.1; XM_011625531.1.
DR AlphaFoldDB; W1PI49; -.
DR STRING; 13333.W1PI49; -.
DR EnsemblPlants; ERN07301; ERN07301; AMTR_s00019p00218240.
DR GeneID; 18435519; -.
DR Gramene; ERN07301; ERN07301; AMTR_s00019p00218240.
DR KEGG; atr:18435519; -.
DR eggNOG; KOG0288; Eukaryota.
DR HOGENOM; CLU_000288_57_10_1; -.
DR OMA; GRPCISP; -.
DR OrthoDB; 458014at2759; -.
DR Proteomes; UP000017836; Unassembled WGS sequence.
DR GO; GO:0000421; C:autophagosome membrane; IBA:GO_Central.
DR GO; GO:0000045; P:autophagosome assembly; IBA:GO_Central.
DR GO; GO:0043170; P:macromolecule metabolic process; IEA:UniProt.
DR GO; GO:0006807; P:nitrogen compound metabolic process; IEA:UniProt.
DR GO; GO:0044238; P:primary metabolic process; IEA:UniProt.
DR CDD; cd22887; Atg16_CCD; 1.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR045160; ATG16.
DR InterPro; IPR013923; Autophagy-rel_prot_16_dom.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19878; AUTOPHAGY PROTEIN 16-LIKE; 1.
DR PANTHER; PTHR19878:SF8; AUTOPHAGY-RELATED 16, ISOFORM F; 1.
DR Pfam; PF08614; ATG16; 1.
DR Pfam; PF00400; WD40; 6.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 5.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000017836};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 46..166
FT /note="Autophagy-related protein 16"
FT /evidence="ECO:0000259|Pfam:PF08614"
FT REPEAT 219..260
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 302..344
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 359..378
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 448..476
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 478..510
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT COILED 77..185
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 510 AA; 56251 MW; 90423F741E9F4FAF CRC64;
MDGPAVMAIR HALSALRRRH LLEEGAHIPA FSALSRQFVT QGSEWKEKAE GLEVELQQCY
KAQARLSEQL VVEVAECRDA KALLQEKETS LNELQKEVAE GRDEISKLKE LLEENRKALD
LAISENQELR SQLEEEILKA RNAESENKML IDRWMMQKMQ DAERLNEANA IYKEMMDKLK
ASNMQQLVQQ QVDGVVRLSE TWTSEALTDL PSPTWKHRLQ AHEGACGSIL FEPNSDCLIT
GGLDQIIRVW DTRTGTNTNT LTGCLGSILD LAIARDKCII AATSSNKMFV FDQLSRRLSH
TLTGHLDKVC AVDASKVSGK SLVSAAYDRT IRTWDLVKGY CTATLMCHSN CNALCYGIDG
QTVFTGHVDG NLRLWDLRVS GGGKMVSEVA AHAYSVTSVS LSRGGLLVLT SGRDNVHNLF
DVRASLEVCG NFRGGSGSAT NWNRSCISPD DNYVVAGSSD GMVHVWSRRE KGEIVSMLRG
HEASVLTCAW SDTGGPLASA DKKGAVYLWV
//