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Database: UniProt
Entry: W1PI49_AMBTC
LinkDB: W1PI49_AMBTC
Original site: W1PI49_AMBTC 
ID   W1PI49_AMBTC            Unreviewed;       510 AA.
AC   W1PI49;
DT   19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT   19-MAR-2014, sequence version 1.
DT   24-JAN-2024, entry version 46.
DE   RecName: Full=Autophagy-related protein 16 domain-containing protein {ECO:0000259|Pfam:PF08614};
GN   ORFNames=AMTR_s00019p00218240 {ECO:0000313|EMBL:ERN07301.1};
OS   Amborella trichopoda.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX   NCBI_TaxID=13333 {ECO:0000313|EMBL:ERN07301.1, ECO:0000313|Proteomes:UP000017836};
RN   [1] {ECO:0000313|Proteomes:UP000017836}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=24357323;
RG   Amborella Genome Project;
RT   "The Amborella genome and the evolution of flowering plants.";
RL   Science 342:1241089-1241089(2013).
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DR   EMBL; KI393807; ERN07301.1; -; Genomic_DNA.
DR   RefSeq; XP_006845626.1; XM_006845563.2.
DR   RefSeq; XP_011623833.1; XM_011625531.1.
DR   AlphaFoldDB; W1PI49; -.
DR   STRING; 13333.W1PI49; -.
DR   EnsemblPlants; ERN07301; ERN07301; AMTR_s00019p00218240.
DR   GeneID; 18435519; -.
DR   Gramene; ERN07301; ERN07301; AMTR_s00019p00218240.
DR   KEGG; atr:18435519; -.
DR   eggNOG; KOG0288; Eukaryota.
DR   HOGENOM; CLU_000288_57_10_1; -.
DR   OMA; GRPCISP; -.
DR   OrthoDB; 458014at2759; -.
DR   Proteomes; UP000017836; Unassembled WGS sequence.
DR   GO; GO:0000421; C:autophagosome membrane; IBA:GO_Central.
DR   GO; GO:0000045; P:autophagosome assembly; IBA:GO_Central.
DR   GO; GO:0043170; P:macromolecule metabolic process; IEA:UniProt.
DR   GO; GO:0006807; P:nitrogen compound metabolic process; IEA:UniProt.
DR   GO; GO:0044238; P:primary metabolic process; IEA:UniProt.
DR   CDD; cd22887; Atg16_CCD; 1.
DR   CDD; cd00200; WD40; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR   InterPro; IPR045160; ATG16.
DR   InterPro; IPR013923; Autophagy-rel_prot_16_dom.
DR   InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   PANTHER; PTHR19878; AUTOPHAGY PROTEIN 16-LIKE; 1.
DR   PANTHER; PTHR19878:SF8; AUTOPHAGY-RELATED 16, ISOFORM F; 1.
DR   Pfam; PF08614; ATG16; 1.
DR   Pfam; PF00400; WD40; 6.
DR   PRINTS; PR00320; GPROTEINBRPT.
DR   SMART; SM00320; WD40; 7.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS00678; WD_REPEATS_1; 2.
DR   PROSITE; PS50082; WD_REPEATS_2; 5.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000017836};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW   ProRule:PRU00221}.
FT   DOMAIN          46..166
FT                   /note="Autophagy-related protein 16"
FT                   /evidence="ECO:0000259|Pfam:PF08614"
FT   REPEAT          219..260
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          302..344
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          359..378
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          448..476
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          478..510
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   COILED          77..185
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   510 AA;  56251 MW;  90423F741E9F4FAF CRC64;
     MDGPAVMAIR HALSALRRRH LLEEGAHIPA FSALSRQFVT QGSEWKEKAE GLEVELQQCY
     KAQARLSEQL VVEVAECRDA KALLQEKETS LNELQKEVAE GRDEISKLKE LLEENRKALD
     LAISENQELR SQLEEEILKA RNAESENKML IDRWMMQKMQ DAERLNEANA IYKEMMDKLK
     ASNMQQLVQQ QVDGVVRLSE TWTSEALTDL PSPTWKHRLQ AHEGACGSIL FEPNSDCLIT
     GGLDQIIRVW DTRTGTNTNT LTGCLGSILD LAIARDKCII AATSSNKMFV FDQLSRRLSH
     TLTGHLDKVC AVDASKVSGK SLVSAAYDRT IRTWDLVKGY CTATLMCHSN CNALCYGIDG
     QTVFTGHVDG NLRLWDLRVS GGGKMVSEVA AHAYSVTSVS LSRGGLLVLT SGRDNVHNLF
     DVRASLEVCG NFRGGSGSAT NWNRSCISPD DNYVVAGSSD GMVHVWSRRE KGEIVSMLRG
     HEASVLTCAW SDTGGPLASA DKKGAVYLWV
//
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