ID W1PP24_AMBTC Unreviewed; 850 AA.
AC W1PP24;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 44.
DE RecName: Full=MIF4G domain-containing protein {ECO:0000259|SMART:SM00543};
GN ORFNames=AMTR_s00029p00245860 {ECO:0000313|EMBL:ERN09808.1};
OS Amborella trichopoda.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX NCBI_TaxID=13333 {ECO:0000313|EMBL:ERN09808.1, ECO:0000313|Proteomes:UP000017836};
RN [1] {ECO:0000313|Proteomes:UP000017836}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24357323;
RG Amborella Genome Project;
RT "The Amborella genome and the evolution of flowering plants.";
RL Science 342:1241089-1241089(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the NCBP1 family.
CC {ECO:0000256|ARBA:ARBA00007413}.
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DR EMBL; KI392980; ERN09808.1; -; Genomic_DNA.
DR RefSeq; XP_006848227.1; XM_006848164.2.
DR AlphaFoldDB; W1PP24; -.
DR STRING; 13333.W1PP24; -.
DR EnsemblPlants; ERN09808; ERN09808; AMTR_s00029p00245860.
DR GeneID; 18437968; -.
DR Gramene; ERN09808; ERN09808; AMTR_s00029p00245860.
DR KEGG; atr:18437968; -.
DR eggNOG; KOG1104; Eukaryota.
DR HOGENOM; CLU_013207_1_0_1; -.
DR OMA; CAAEGLM; -.
DR OrthoDB; 5477544at2759; -.
DR Proteomes; UP000017836; Unassembled WGS sequence.
DR GO; GO:0005845; C:mRNA cap binding complex; IBA:GO_Central.
DR GO; GO:0005846; C:nuclear cap binding complex; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0000339; F:RNA cap binding; IBA:GO_Central.
DR GO; GO:1901527; P:abscisic acid-activated signaling pathway involved in stomatal movement; IEA:EnsemblPlants.
DR GO; GO:0000380; P:alternative mRNA splicing, via spliceosome; IEA:EnsemblPlants.
DR GO; GO:0051607; P:defense response to virus; IEA:EnsemblPlants.
DR GO; GO:0048574; P:long-day photoperiodism, flowering; IEA:EnsemblPlants.
DR GO; GO:0006406; P:mRNA export from nucleus; IEA:InterPro.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IBA:GO_Central.
DR GO; GO:0031053; P:primary miRNA processing; IEA:EnsemblPlants.
DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.180; -; 3.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027159; CBP80.
DR InterPro; IPR015172; MIF4G-like_typ-1.
DR InterPro; IPR015174; MIF4G-like_typ-2.
DR InterPro; IPR003890; MIF4G-like_typ-3.
DR PANTHER; PTHR12412; CAP BINDING PROTEIN; 1.
DR PANTHER; PTHR12412:SF2; NUCLEAR CAP-BINDING PROTEIN SUBUNIT 1; 1.
DR Pfam; PF02854; MIF4G; 1.
DR Pfam; PF09088; MIF4G_like; 1.
DR Pfam; PF09090; MIF4G_like_2; 1.
DR SMART; SM00543; MIF4G; 1.
DR SUPFAM; SSF48371; ARM repeat; 3.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000017836}.
FT DOMAIN 8..229
FT /note="MIF4G"
FT /evidence="ECO:0000259|SMART:SM00543"
FT REGION 763..791
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 642..720
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 773..791
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 850 AA; 96931 MW; D95A0C4F25F87AE2 CRC64;
MSSWRSFLLR IGDKCPEYGG NSDIEDHIEK CYGILWRELD HSPDDISLFL LQCAEQLPHK
SSIYGTLVGL INLDNDDFVK RVVSDTQTNL QNALDLGSCD KIRILLRFLT VLMCSNVVQP
SAVIEVFEAL LSSAATTVDE EKGNPSWQAR ADFYVTCILS CLPWGGAELF ERASEEIERV
MVGIEAYLSI RKRVSDTGFL VFDNDDKTDE NIAEKDFLED LWERIQALSS NGWKVDSAPR
PHLSFEARLV SGKCHDFGPI SCPEQPAALS SLSMNRSDKQ KHEAELKYPQ RLRRLNIFPA
SKIEENMQPI DRFIVEEYLL DVLMYLNGCR KECAAYMVGL PVPFRYEYLM AETIFSQLLL
LPQPAFKPIY YTLVIIDLCK ALPGAFPAVV AGAVRAIFER VGDLDMECRT RLVLWFSHHL
SNFQFIWQWE EWAHCLDLPK WAPQRVFVQE VLEREVRLSY WDKIKQSIEN ASTLEELLPP
NGGPSFKYSA GDSEEHSLSE NLCTMVRGRK TAREVISWLE EAIVPTHGPK VALEVVVQTL
LDIGSKSFTH LVNVLERYGQ VISKLCPDQE KQVWLIDEVS LYWKNSAQMT ALTIDRMMGY
RLVSNLSIIS WVFSPANVKQ FHTSDRPWEI LRNAVGKTYN RIRDLRKEIS SLEKSIVSAE
ASAAEAQAES DAAESRLEVV DGEPIQAEPP SRLKRLKAFA EKAKEEAVSL QESLEAKQAL
LSRAITENEA MFISLYKSLA NVLMECLPRV YCDKHNDHIQ LDLDDEESSK MDVDDDENKK
SNRGGEINGH DTQEEEHWCH CTLGYVKALS RQYASEIWLH IEKLDAEVFT KDMHPSFLNA
VYAGLRRPYR
//
