ID W1RQ18_9GAMM Unreviewed; 341 AA.
AC W1RQ18;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE SubName: Full=DNA polymerase V subunit UmuC {ECO:0000313|EMBL:ETI59101.1};
DE EC=2.7.7.7 {ECO:0000313|EMBL:ETI59101.1};
GN ORFNames=D104_12185 {ECO:0000313|EMBL:ETI59101.1};
OS Marinomonas profundimaris.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Oceanospirillaceae; Marinomonas.
OX NCBI_TaxID=1208321 {ECO:0000313|EMBL:ETI59101.1, ECO:0000313|Proteomes:UP000018857};
RN [1] {ECO:0000313|EMBL:ETI59101.1, ECO:0000313|Proteomes:UP000018857}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=D104 {ECO:0000313|EMBL:ETI59101.1,
RC ECO:0000313|Proteomes:UP000018857};
RX PubMed=24459272;
RA Dong C., Bai X., Lai Q., Xie Y., Chen X., Shao Z.;
RT "Draft Genome Sequence of Marinomonas sp. Strain D104, a Polycyclic
RT Aromatic Hydrocarbon-Degrading Bacterium from the Deep-Sea Sediment of the
RT Arctic Ocean.";
RL Genome Announc. 2:0-0(2014).
CC -!- SIMILARITY: Belongs to the DNA polymerase type-Y family.
CC {ECO:0000256|ARBA:ARBA00010945}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETI59101.1}.
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DR EMBL; AYOZ01000034; ETI59101.1; -; Genomic_DNA.
DR AlphaFoldDB; W1RQ18; -.
DR STRING; 1208321.D104_12185; -.
DR PATRIC; fig|1208321.3.peg.2418; -.
DR eggNOG; COG0389; Bacteria.
DR Proteomes; UP000018857; Unassembled WGS sequence.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR GO; GO:0009432; P:SOS response; IEA:UniProtKB-KW.
DR CDD; cd01700; PolY_Pol_V_umuC; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.30.1490.100; DNA polymerase, Y-family, little finger domain; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR036775; DNA_pol_Y-fam_lit_finger_sf.
DR InterPro; IPR017961; DNA_pol_Y-fam_little_finger.
DR InterPro; IPR025188; DUF4113.
DR InterPro; IPR024728; PolY_HhH_motif.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001126; UmuC.
DR PANTHER; PTHR11076; DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER; 1.
DR PANTHER; PTHR11076:SF34; PROTEIN UMUC; 1.
DR Pfam; PF13438; DUF4113; 1.
DR Pfam; PF00817; IMS; 1.
DR Pfam; PF11799; IMS_C; 1.
DR Pfam; PF11798; IMS_HHH; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF100879; Lesion bypass DNA polymerase (Y-family), little finger domain; 1.
DR PROSITE; PS50173; UMUC; 1.
PE 3: Inferred from homology;
KW DNA damage {ECO:0000256|ARBA:ARBA00023199};
KW Nucleotidyltransferase {ECO:0000313|EMBL:ETI59101.1};
KW SOS mutagenesis {ECO:0000256|ARBA:ARBA00023199};
KW SOS response {ECO:0000256|ARBA:ARBA00023236};
KW Transferase {ECO:0000313|EMBL:ETI59101.1}.
FT DOMAIN 1..108
FT /note="UmuC"
FT /evidence="ECO:0000259|PROSITE:PS50173"
SQ SEQUENCE 341 AA; 38331 MW; F398C54BFC7B5860 CRC64;
MSSRVMRTLE EMAPRVEVYS IDEAFLDLTG IESAISLVEF GQQVRARIGH WIGITVCVGI
APTKTLAKLA NHAAKKYPAT QGVVDLTNPD RQRRLLALVP VDDVWGVGRR LSKRLNALGI
TTALDLANAS PRAIRDQFSV VLERTVRELN GESCIELEEI PPTKKQIVCS RSFGEKVTQF
ELLREAVCEY ATRATEKLRK EQQQAKVMTV FIRTSPFKDN EPQYSSSASG ELLIPSCDTR
DFIELANHLL KRIWKDGFRY AKAGVMLSDF YDPGMFQPGL FDDVSTRSNS QQLMSVLDTI
NQSGAGKVFF AGQGLKKDWS MKREHLSPAY TTRWDQLPRV K
//
