ID W1RXR3_9GAMM Unreviewed; 398 AA.
AC W1RXR3;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE SubName: Full=RNA helicase {ECO:0000313|EMBL:ETI60484.1};
GN ORFNames=D104_09225 {ECO:0000313|EMBL:ETI60484.1};
OS Marinomonas profundimaris.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Oceanospirillaceae; Marinomonas.
OX NCBI_TaxID=1208321 {ECO:0000313|EMBL:ETI60484.1, ECO:0000313|Proteomes:UP000018857};
RN [1] {ECO:0000313|EMBL:ETI60484.1, ECO:0000313|Proteomes:UP000018857}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=D104 {ECO:0000313|EMBL:ETI60484.1,
RC ECO:0000313|Proteomes:UP000018857};
RX PubMed=24459272;
RA Dong C., Bai X., Lai Q., Xie Y., Chen X., Shao Z.;
RT "Draft Genome Sequence of Marinomonas sp. Strain D104, a Polycyclic
RT Aromatic Hydrocarbon-Degrading Bacterium from the Deep-Sea Sediment of the
RT Arctic Ocean.";
RL Genome Announc. 2:0-0(2014).
CC -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC {ECO:0000256|RuleBase:RU000492}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETI60484.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AYOZ01000013; ETI60484.1; -; Genomic_DNA.
DR RefSeq; WP_024023981.1; NZ_AYOZ01000013.1.
DR AlphaFoldDB; W1RXR3; -.
DR STRING; 1208321.D104_09225; -.
DR PATRIC; fig|1208321.3.peg.1836; -.
DR eggNOG; COG0513; Bacteria.
DR OrthoDB; 9808889at2; -.
DR Proteomes; UP000018857; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd00268; DEADc; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR47959:SF11; ATP-DEPENDENT RNA HELICASE DEAD BOX FAMILY; 1.
DR PANTHER; PTHR47959; ATP-DEPENDENT RNA HELICASE RHLE-RELATED; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU000492};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000256|RuleBase:RU000492};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU000492};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU000492}.
FT DOMAIN 1..29
FT /note="DEAD-box RNA helicase Q"
FT /evidence="ECO:0000259|PROSITE:PS51195"
FT DOMAIN 32..206
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 222..393
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT MOTIF 1..29
FT /note="Q motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00552"
SQ SEQUENCE 398 AA; 44064 MW; 196358CF1CB6DC89 CRC64;
MPFSKLGLSS PIVKAIKELG YKKPTPVQEQ AIPIILSGKD LIATAQTGTG KTAAFVLPTL
ERFNKVGTLR GKRIRALILT PTRELAVQVE ANVALYSKHL KLTSMAVYGG VDMEAQKERL
IEGVDILVAT PGRLLDLAHQ RALHFDELEV LVLDEADRMI DMGFAENLYK ILDRLPERRQ
NLLFSATMTD SVRALANEFS DSKVSDQAEE ITISPKSKTA PNIKQWLITV DKDTKSALLS
HLIKEQEWDQ ALIFIEKKHG AAKLVAQLAK RGIEADSIHG DRSQAMREKI LADFKSGKLK
YLVATGVAAR GIDIGELSRV VNYDLPFKPE EYVHRIGRTG RAGAAGEAIS FVAMGDFKNL
IAIESRLKHI IVRKEIAGFP VRKVVPVSIL NYVRKANR
//
