ID W1RZD0_9SPHN Unreviewed; 310 AA.
AC W1RZD0;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:ETI60198.1};
GN ORFNames=C100_19520 {ECO:0000313|EMBL:ETI60198.1};
OS Sphingobium sp. C100.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1207055 {ECO:0000313|EMBL:ETI60198.1, ECO:0000313|Proteomes:UP000018867};
RN [1] {ECO:0000313|EMBL:ETI60198.1, ECO:0000313|Proteomes:UP000018867}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C100 {ECO:0000313|EMBL:ETI60198.1,
RC ECO:0000313|Proteomes:UP000018867};
RX PubMed=24482512;
RA Dong C., Bai X., Lai Q., Xie Y., Chen X., Shao Z.;
RT "Draft Genome Sequence of Sphingobium sp. Strain C100, a Polycyclic
RT Aromatic Hydrocarbon-Degrading Bacterium from the Deep-Sea Sediment of the
RT Arctic Ocean.";
RL Genome Announc. 2:0-0(2014).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETI60198.1}.
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DR EMBL; AYOY01000185; ETI60198.1; -; Genomic_DNA.
DR RefSeq; WP_024021421.1; NZ_AYOY01000185.1.
DR AlphaFoldDB; W1RZD0; -.
DR STRING; 1207055.C100_19520; -.
DR PATRIC; fig|1207055.3.peg.3737; -.
DR eggNOG; COG0583; Bacteria.
DR OrthoDB; 9787460at2; -.
DR Proteomes; UP000018867; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30537:SF3; RUBISCO TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000018867}.
FT DOMAIN 2..59
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 310 AA; 34515 MW; 56C96FEB7637B624 CRC64;
MFDWDDLRVF LAVARAHKVA PAARALGIDA TTIARRLARL EKALGAELFE MGMGERSLTS
HGQVLLRHAE GAESAALAAM EEVKGQEHRL SGQVRLSVAE GFGTWVLAPG MGDFNRRHPG
IRLDLITASG FLNPSNREAD MAVMLARPQR GRLTVRRLGD YRLHLYASPA YLERVGRPGR
PADLRHHTLI GYVPEFIFTP ELNYLDEVEA GLEANLRSTS IIMQQRMIAE GAGIGVLPDF
IGRRDPGLMP LMVDRVEITR SFWLVMHGDL RRLARIGAVA DWLQQRVDIL SGHRDPDITR
KSIDAARPPR
//
