ID W1SB98_9SPHN Unreviewed; 362 AA.
AC W1SB98;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=LacI family transcriptional regulator {ECO:0000313|EMBL:ETI65274.1};
GN ORFNames=C100_02585 {ECO:0000313|EMBL:ETI65274.1};
OS Sphingobium sp. C100.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1207055 {ECO:0000313|EMBL:ETI65274.1, ECO:0000313|Proteomes:UP000018867};
RN [1] {ECO:0000313|EMBL:ETI65274.1, ECO:0000313|Proteomes:UP000018867}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C100 {ECO:0000313|EMBL:ETI65274.1,
RC ECO:0000313|Proteomes:UP000018867};
RX PubMed=24482512;
RA Dong C., Bai X., Lai Q., Xie Y., Chen X., Shao Z.;
RT "Draft Genome Sequence of Sphingobium sp. Strain C100, a Polycyclic
RT Aromatic Hydrocarbon-Degrading Bacterium from the Deep-Sea Sediment of the
RT Arctic Ocean.";
RL Genome Announc. 2:0-0(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETI65274.1}.
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DR EMBL; AYOY01000024; ETI65274.1; -; Genomic_DNA.
DR AlphaFoldDB; W1SB98; -.
DR STRING; 1207055.C100_02585; -.
DR PATRIC; fig|1207055.3.peg.506; -.
DR eggNOG; COG1609; Bacteria.
DR Proteomes; UP000018867; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd01545; PBP1_SalR; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF138; HTH-TYPE TRANSCRIPTIONAL REGULATOR KDGR; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000018867};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 20..69
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
FT DOMAIN 25..79
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 362 AA; 38192 MW; FB1C47C06EBF664C CRC64;
MPPPETRYQE AGGMKLMTRR RRNGVTIRAV AERAGVSAMT VSNVLNGAGR ASAATIATVR
AAIAELGYVP NLAARRLAKA RATTVGLLYS NRRTPFLDAV LVGTLRATNA HGLQLILRDG
EGVTRDEAER IARDLVQSGA DALLLIPPFA EQLSGSAELA ALAVPLAAIA TGTAMPDITT
VRIDNRAAMH ALTDRVIASG HRRIAYVAGP DPYSVVAARL DGFRAALSQQ GIAEYPNLIV
QHGAFDYAAG MAAGQALLAL PDRPTAIICS SDDLAAGVIA QASHQGLRLP AELSVTGFDD
TILASRIWPP LTVVRQPVED MAFRATQCLI AALGDRTGGA WVSDEIFSHD IIERQSIASV
HD
//
