ID W1X2Y0_ECOLX Unreviewed; 287 AA.
AC W1X2Y0;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=YicC family protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=Q609_ECAC01392G0012 {ECO:0000313|EMBL:ETJ24546.1};
OS Escherichia coli DORA_A_5_14_21.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=1403943 {ECO:0000313|EMBL:ETJ24546.1, ECO:0000313|Proteomes:UP000018853};
RN [1] {ECO:0000313|EMBL:ETJ24546.1, ECO:0000313|Proteomes:UP000018853}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DORA_A_5_14_21 {ECO:0000313|Proteomes:UP000018853};
RA Brown C.T., Sharon I., Thomas B.C., Castelle C.J., Morowitz M.J.,
RA Banfield J.F.;
RT "A Varibaculum cambriense genome reconstructed from a premature infant gut
RT community with otherwise low bacterial novelty that shifts toward anaerobic
RT metabolism during the third week of life.";
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
CC Evidence={ECO:0000256|ARBA:ARBA00001968};
CC -!- SIMILARITY: Belongs to the YicC/YloC family.
CC {ECO:0000256|ARBA:ARBA00035648}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETJ24546.1}.
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DR EMBL; AZLZ01001392; ETJ24546.1; -; Genomic_DNA.
DR AlphaFoldDB; W1X2Y0; -.
DR SMR; W1X2Y0; -.
DR PATRIC; fig|1403943.3.peg.1811; -.
DR Proteomes; UP000018853; Unassembled WGS sequence.
DR GO; GO:0004521; F:RNA endonuclease activity; IEA:InterPro.
DR InterPro; IPR013551; YicC-like_C.
DR InterPro; IPR013527; YicC-like_N.
DR InterPro; IPR005229; YicC/YloC-like.
DR NCBIfam; TIGR00255; YicC/YloC family endoribonuclease; 1.
DR PANTHER; PTHR30636; UNCHARACTERIZED; 1.
DR PANTHER; PTHR30636:SF3; UPF0701 PROTEIN YICC; 1.
DR Pfam; PF08340; DUF1732; 1.
DR Pfam; PF03755; YicC_N; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722}.
FT DOMAIN 2..153
FT /note="Endoribonuclease YicC-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF03755"
FT DOMAIN 203..287
FT /note="Endoribonuclease YicC-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF08340"
FT COILED 182..218
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 287 AA; 33159 MW; 737AD353F91CA3B9 CRC64;
MIRSMTAYAR REIKGEWGSA TWEMRSVNQR YLETYFRLPE QFRSLEPVVR ERIRSRLTRG
KVECTLRYEP DVSAQGELIL NEKLAKQLVT AANWVKMQSD EGEINPVDIL RWPGVMAAQE
QDLDAIAAEI LAALDGTLDD FIVARETEGQ ALKALIEQRL EGVTAEVVKV RAHMPEILQW
QRERLVAKLE DAQVQLENNR LEQELVLLAQ RIDVAEELDR LEAHVKETYN ILKKKEAVGR
RLDFMMQEFN RESNTLASKS INAEVTNSAI ELKVLIEQMR EQIQNIE
//