ID W1Y0N7_9ZZZZ Unreviewed; 217 AA.
AC W1Y0N7;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 13-SEP-2023, entry version 24.
DE SubName: Full=DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:ETJ35966.1};
DE Flags: Fragment;
GN ORFNames=Q604_UNBC09727G0001 {ECO:0000313|EMBL:ETJ35966.1};
OS human gut metagenome.
OC unclassified sequences; metagenomes; organismal metagenomes.
OX NCBI_TaxID=408170 {ECO:0000313|EMBL:ETJ35966.1};
RN [1] {ECO:0000313|EMBL:ETJ35966.1}
RP NUCLEOTIDE SEQUENCE.
RA Brown C.T., Sharon I., Thomas B.C., Castelle C.J., Morowitz M.J.,
RA Banfield J.F.;
RT "A Varibaculum cambriense genome reconstructed from a premature infant gut
RT community with otherwise low bacterial novelty that shifts toward anaerobic
RT metabolism during the third week of life.";
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETJ35966.1}.
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DR EMBL; AZMM01009727; ETJ35966.1; -; Genomic_DNA.
DR AlphaFoldDB; W1Y0N7; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd06928; RNAP_alpha_NTD; 1.
DR Gene3D; 2.170.120.12; DNA-directed RNA polymerase, insert domain; 1.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR011773; DNA-dir_RpoA.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR036643; RNApol_insert_sf.
DR NCBIfam; TIGR02027; rpoA; 1.
DR Pfam; PF01000; RNA_pol_A_bac; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SMART; SM00662; RPOLD; 1.
DR SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000313|EMBL:ETJ35966.1};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 10..217
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|SMART:SM00662"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ETJ35966.1"
FT NON_TER 217
FT /evidence="ECO:0000313|EMBL:ETJ35966.1"
SQ SEQUENCE 217 AA; 23492 MW; 262E1F3A4653BFD3 CRC64;
ITKIDENKDY GKFVIEPLER GYGTTLGNSL RRVLLASLPG AAVTSIDIDG VLHEFDTIPG
VREDVMQIIL NIKGIAVKSY VKDEKTIELD VEGPAEVTAG DILTDSDIEI VNPDHYLFTI
GEGASFKATM TVNTGRGYVP ADENKKDNAP VGTLAVDSIY TPVTKVNYQV EPARVGSNDG
FDKLTLEILT NGTIIPEDAL GLSARILTEH LDLFTNL
//
