ID W2DXR9_9PSED Unreviewed; 276 AA.
AC W2DXR9;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=Putative IcrL family regulatory protein {ECO:0000313|EMBL:ETK24134.1};
GN ORFNames=H096_06922 {ECO:0000313|EMBL:ETK24134.1};
OS Pseudomonas sp. FH1.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1284392 {ECO:0000313|EMBL:ETK24134.1, ECO:0000313|Proteomes:UP000018863};
RN [1] {ECO:0000313|EMBL:ETK24134.1, ECO:0000313|Proteomes:UP000018863}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FH1 {ECO:0000313|EMBL:ETK24134.1,
RC ECO:0000313|Proteomes:UP000018863};
RX PubMed=24286439; DOI=10.1111/1462-2920.12345;
RA Rhodes G., Bosma H., Studholme D., Arnold D.L., Jackson R.W., Pickup R.W.;
RT "The rulB gene of plasmid pWW0 is a hotspot for the site-specific insertion
RT of integron-like elements found in the chromosomes of environmental
RT Pseudomonas fluorescens group bacteria.";
RL Environ. Microbiol. 16:2374-2388(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETK24134.1}.
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DR EMBL; AOHM01000016; ETK24134.1; -; Genomic_DNA.
DR RefSeq; WP_033897417.1; NZ_AOHM01000016.1.
DR AlphaFoldDB; W2DXR9; -.
DR PATRIC; fig|1284392.3.peg.1371; -.
DR Proteomes; UP000018863; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd00090; HTH_ARSR; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011991; ArsR-like_HTH.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR001845; HTH_ArsR_DNA-bd_dom.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF35; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00418; HTH_ARSR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 15..78
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 79..262
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 276 AA; 29912 MW; 1813CD5B7EC46690 CRC64;
MDSTGRNDSA REVGSGGVSR LFALLRTLGD VPEGGERVTQ LAQQVGLSQP TTHRLLRSLM
DEGMVEQDAR SKRYRLSLEF FALAANAGKT GNLRDLVRPS MLRLSASLGD SLFLLARSGF
DAVCLDRSEG PYPIRTFTGD IGGRVALGVG QGSLAILAFL PEEERETVIR YNLPRLKDFH
LYDEVLLRSE VENVRNLGYA ARNTGVLEGM AGLAVPILNR DGHAVAALSV ATISDRLGPS
RLPMVVELLK REAAAIGPRI NPFDPTLRRP SQTFGG
//
