ID W2J353_PHYPR Unreviewed; 1789 AA.
AC W2J353;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ETL40820.1};
GN ORFNames=L915_08172 {ECO:0000313|EMBL:ETK87339.1}, L916_08095
GN {ECO:0000313|EMBL:ETL40820.1}, L917_07994
GN {ECO:0000313|EMBL:ETL93963.1};
OS Phytophthora parasitica (Potato buckeye rot agent).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=4792 {ECO:0000313|EMBL:ETL40820.1, ECO:0000313|Proteomes:UP000053864};
RN [1] {ECO:0000313|EMBL:ETL93963.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CHvinca01 {ECO:0000313|EMBL:ETL93963.1};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Arredondo F., Hong C., Coffey M., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Phytophthora parasitica CHvinca01.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ETK87339.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CJ02B3 {ECO:0000313|EMBL:ETK87339.1};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Arredondo F., Hong C., Coffey M., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Phytophthora parasitica CJ02B3.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:ETL40820.1, ECO:0000313|Proteomes:UP000053864}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CJ05E6 {ECO:0000313|EMBL:ETL40820.1,
RC ECO:0000313|Proteomes:UP000053864};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Arredondo F., Hong C., Coffey M., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Phytophthora parasitica CJ05E6.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KI686156; ETK87339.1; -; Genomic_DNA.
DR EMBL; KI672781; ETL40820.1; -; Genomic_DNA.
DR EMBL; KI679496; ETL93963.1; -; Genomic_DNA.
DR EnsemblProtists; ETK87339; ETK87339; L915_08172.
DR EnsemblProtists; ETL40820; ETL40820; L916_08095.
DR EnsemblProtists; ETL93963; ETL93963; L917_07994.
DR VEuPathDB; FungiDB:PPTG_11717; -.
DR Proteomes; UP000053236; Unassembled WGS sequence.
DR Proteomes; UP000053864; Unassembled WGS sequence.
DR Proteomes; UP000054423; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 3.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR044972; Mot1.
DR InterPro; IPR022707; Mot1_central_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR36498; TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172; 1.
DR PANTHER; PTHR36498:SF1; TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172; 1.
DR Pfam; PF12054; DUF3535; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 1214..1387
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 1566..1714
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 187..235
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 187..204
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 218..235
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1789 AA; 197466 MW; EF9B970E30645F74 CRC64;
MSAQATRLEN LFLLLRDGSS AQIRENAAEK LGEVAARSSD VCESILQQLR PLIVDSEWEI
RVAASKCLDV VARSLRHENE NVADLFALVS LGSQEASSAA LNLQTVDISQ VVQEGAPLLR
SGGEEYQYTT NLTEEERRIH AVKQRRLLLK RLSGAGGPIW KTREDSLTKQ LLPRLNRDHA
QEIADDIETS ESQPHAEEEP TTAINRKQAS DILSIPSRSK RRSVHDSATG SGVKRLKADD
CSDTEDVIMQ SGGEIGSHCR IDESETQTKA AIVAGLVSDM FESMFDSKWE VRHGALLSLR
QILLSSHFTA AVEAARPAVD EATQRNFVDK WLEECLIRCI CVLALDQFVD YSADGSVSPV
REVCAQVFGI LLGSLSSEDT LVGYLQVVRT LFSGLTWQAC HGGLLGLKYL VQAHKKHAQV
LIPLFFDDIV TAFSQSDSEE DVLVLAAEMF RDFVSFLDRI EPVGITNTTG LLWRSLKLHE
SAGMVSASIV QALSAWHSNP TVAELLQDNA KVQAALWQNL SCTIPMLHHH SLSVRASSTT
CVAAIFSRES SSSQSNSANF AKVFLPHLLL QVLLEEEESI QRSLLSAWKQ IVRNLSKEEL
LMPVINGNLP KWMKLLWSTN EISCLNVEVA NSEGTVSIAD VNQSVDRLAQ ENLSSRVVFA
EALGFAVSHV PLSSSCMTQL IRLVCDGLCS SSGERQCGVL LALSKWGYYE QHLNVEDPQE
QSRRIQHLQD SIGAFLGSFA ENQWRTGQSD AASEEGPVFY REQLGSLKRV VQMEACIIDI
FSSAGISLQP TEKPDAASSA DISRQIAEHI ALFPYEKLQD HPKEFELAHF KRQDLFLVDE
LVQQSFSRFY HRIQGLGSSA YCVILPIPKK SGFLVKALMN SIKEEEEIAF RAISAQAIAR
FVVDQAHTQK KCVAKIVSNL CNSAAALIGA TSDPSDSNPQ HDPSPVILPD VLKKIRVRAV
GAEAALSEIC KHTGDSLFET CRALEDAISK AWKQQNVDEL TIQRCMHLIM LVMPHTESGA
MEKCLSWLER LAQLMQQPCE DHQTRRTVAH AVAIICKNAQ GQHREHAMLI VYSSIFVAFS
NTGSVKTEAL EAAVMVLDRI VHILGADLTP YVPSLVHYAM KTMSSQSKRI RTFAAGAFAD
LVPLIPLQMD LELHDSAQLL PDSLRTIVEV NAVSRSFLES FSTGKAVQHA DVTAGLAPET
TLRLYQQHGV DWLCFMAKNN LHGILADDMG LGKTLQTLAA MASTLGMELK NEASMPCIIV
CPPIIVHHWI QEIKKYIPGI FASIIDYSTP ASDRKRLRRG NAIPISGRGS TLIITTYSIL
RADIKYFSSV EYMYVVLDEA HLIRNPSTGL FRAVLELGAS HRVALSGTPL QNNVTDLWAL
FEFLMPGYLG DFTVFRREYV LPTTKSKERN ATTKQKEQAA IAIAKLHQKV LPFILRRTKD
QVLDELPPKI ISNVLLPLSP LQKRLYSLAS STEEDTSSVN SSRTKNQEKD AATTNVLTNL
QLLRKICVHP ALVADDKAAQ GLNSKEKSAL SDWKSSGKMT GLHDLLVECC DIAARDQKTS
IDSASNADDT SFSPHRCLVF AHLQKTLDLT EQMLQDALPG VMYRRLDGRT PHSKRADIVQ
QFNADPSIDV LLLTTSVGGL GLTLTGADTV IFIEHSWNPF VDLQAMDRAH RIGQKRTVRV
FRLIMEESLE EHIVNLQQFK EQVAATVVQK SDAQSSMNTN TRGVLNLLQA SSSAVAAKEL
RASVAATKSS EGDQHVAAAL PQGAQELLDQ IGELWDESQY ESLAFPEDE
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