GenomeNet

Database: UniProt
Entry: W2K4J1_PHYPR
LinkDB: W2K4J1_PHYPR
Original site: W2K4J1_PHYPR 
ID   W2K4J1_PHYPR            Unreviewed;       911 AA.
AC   W2K4J1;
DT   19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT   19-MAR-2014, sequence version 1.
DT   24-JAN-2024, entry version 47.
DE   RecName: Full=RING-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=L917_20002 {ECO:0000313|EMBL:ETL79345.1};
OS   Phytophthora parasitica (Potato buckeye rot agent).
OC   Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC   Phytophthora.
OX   NCBI_TaxID=4792 {ECO:0000313|EMBL:ETL79345.1};
RN   [1] {ECO:0000313|EMBL:ETL79345.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CHvinca01 {ECO:0000313|EMBL:ETL79345.1};
RG   The Broad Institute Genomics Platform;
RA   Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA   Machado M., Johnson C.S., Arredondo F., Hong C., Coffey M., Young S.K.,
RA   Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L.,
RA   Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA   Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA   Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA   Wortman J., Nusbaum C., Birren B.;
RT   "The Genome Sequence of Phytophthora parasitica CHvinca01.";
RL   Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; KI683058; ETL79344.1; -; Genomic_DNA.
DR   EMBL; KI683058; ETL79345.1; -; Genomic_DNA.
DR   EnsemblProtists; ETL79344; ETL79344; L917_20002.
DR   EnsemblProtists; ETL79345; ETL79345; L917_20002.
DR   VEuPathDB; FungiDB:PPTG_18212; -.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   CDD; cd16649; mRING-HC-C3HC5_CGRF1-like; 1.
DR   Gene3D; 3.30.70.330; -; 1.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   InterPro; IPR001841; Znf_RING.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   PANTHER; PTHR22696; E3 UBIQUITIN-PROTEIN LIGASE RNF26; 1.
DR   PANTHER; PTHR22696:SF1; E3 UBIQUITIN-PROTEIN LIGASE RNF26; 1.
DR   Pfam; PF13920; zf-C3HC4_3; 1.
DR   SUPFAM; SSF57850; RING/U-box; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   PROSITE; PS50102; RRM; 1.
DR   PROSITE; PS50089; ZF_RING_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT   DOMAIN          375..450
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          863..900
FT                   /note="RING-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50089"
FT   REGION          1..126
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          184..230
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          583..602
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          684..711
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          743..770
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        25..41
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        188..207
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        208..223
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        584..598
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   911 AA;  102023 MW;  AA689E21908F387D CRC64;
     MRSPSNTSES RSPPRVDGVA ASINQQEEHD VQSSASVQPS QDKAESDEEH DTQVHIPVPT
     RPAPHEPGSE PRTKRMWRAG SRQQLLERTR NRIRRSSLQQ PLDTGGGAAE VATAPSARSV
     SPQGDFAEEI ESEAAEIRTL IARTAELWSA VDRAEHAEDL PPMPQLRSFS ASALHPSLPA
     QYECVEEDDS TLSSDNEEDE DENTETESVT DMTLSSEANE PLRHPNSVES DGRDVVEGLQ
     LEQGEIMDPS NRAINAAKAR AIKNAMLGNL LRLGFRENIT RAALEAGVLE IDHYDSDCEL
     AYVDIFMSLV KMVTDAHVDV VNGENLEQNW AESEAVDANA AYNLEQRSFL PFKWPVFDMA
     QFEFGNARAG TCFNSVCVLT NLPKVSMDRT EELMEILSCN LFCMIGDPIQ VVIPSASSSG
     RTKGHAFLEF DDPDMAKRCA MAIDGLTWGR GPFGRIRGNL FRQYQVKSPA EEQRQTQDYV
     NDDGASFSQS FAVSGSLPAQ NPPRNRIAER FRPREDVAEQ HNLLSDSDED SDAEWVVSRP
     LEYSQFNPSP LDLSAGSVDM REQFEPVQHD GITMHLGWEN EALDDGYSSE DDDNDASFDS
     SSALELQAPD EEKLMDQSIF DELVQDSSYN DSRCSAASGE AQASTATSTA SAAALEALAE
     SGMAEQHWDV QEGDDAEKPW RRYCEDLIVR NREMQEQVAF ARRRILQLSH NNQKLHLLID
     RVERDRDGLL FENDLLQTQL HGYENHAQHH DSLMQELATL RKRLKQKEHT FDLRNLDPHQ
     QVQAAYAVAS RSQASHSFRS VQSALALASA TTLTHCSMEE LKEWEHLLET TLSHVRSAKE
     EKALEMQKKL DRQVEEQNEL KLCVICLSNE KTILCLPCRH LCLCEACSRR EEVTKCPICR
     LEIEEMLAVY S
//
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