ID W2QH07_PHYPN Unreviewed; 727 AA.
AC W2QH07;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 22-FEB-2023, entry version 30.
DE RecName: Full=Replication factor C subunit 1 {ECO:0000256|ARBA:ARBA00020401};
GN ORFNames=PPTG_09472 {ECO:0000313|EMBL:ETN11774.1};
OS Phytophthora parasitica (strain INRA-310).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=761204 {ECO:0000313|EMBL:ETN11774.1, ECO:0000313|Proteomes:UP000018817};
RN [1] {ECO:0000313|Proteomes:UP000018817}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=INRA-310 {ECO:0000313|Proteomes:UP000018817};
RG The Broad Institute Genome Sequencing Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., Chapman S.B.,
RA Gearin G., Goldberg J., Griggs A., Gujja S., Hansen M., Heiman D.,
RA Howarth C., Larimer J., Lui A., MacDonald P.J.P., McCowen C.,
RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., Roberts A.,
RA Saif S., Shea T., Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ETN11774.1, ECO:0000313|Proteomes:UP000018817}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=INRA-310 {ECO:0000313|EMBL:ETN11774.1,
RC ECO:0000313|Proteomes:UP000018817};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Arredondo F., Hong C., Coffey M., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Phytophthora parasitica INRA-310.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KI669578; ETN11774.1; -; Genomic_DNA.
DR RefSeq; XP_008902716.1; XM_008904468.1.
DR AlphaFoldDB; W2QH07; -.
DR EnsemblProtists; ETN11774; ETN11774; PPTG_09472.
DR GeneID; 20179174; -.
DR VEuPathDB; FungiDB:PPTG_09472; -.
DR OrthoDB; 6297at2759; -.
DR Proteomes; UP000018817; Unassembled WGS sequence.
DR GO; GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd17748; BRCT_DNA_ligase_like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.20.272.10; -; 1.
DR Gene3D; 3.40.50.10190; BRCT domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR001357; BRCT_dom.
DR InterPro; IPR036420; BRCT_dom_sf.
DR InterPro; IPR008921; DNA_pol3_clamp-load_cplx_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR012178; RFC1.
DR PANTHER; PTHR23389; CHROMOSOME TRANSMISSION FIDELITY FACTOR 18; 1.
DR PANTHER; PTHR23389:SF6; REPLICATION FACTOR C SUBUNIT 1; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF00533; BRCT; 1.
DR PIRSF; PIRSF036578; RFC1; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00292; BRCT; 1.
DR SUPFAM; SSF52113; BRCT domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF48019; post-AAA+ oligomerization domain-like; 1.
DR PROSITE; PS50172; BRCT; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018817}.
FT DOMAIN 178..257
FT /note="BRCT"
FT /evidence="ECO:0000259|PROSITE:PS50172"
FT REGION 1..158
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 10..26
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 64..144
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 727 AA; 81125 MW; 647495A6FE4E00D8 CRC64;
MDIRSFFQKK PPGSNGNSNS TKKAATPAKS KRAEPEPTPP SRPVARRSAK QNVVVLDDSD
EDEDDVSSKR KVPTKKKTQR VDSDSDFEMQ PSDDEVQEVK PKKEPLKRLR RAAKADSDED
EEMPEVKTKT DVKMEVKMES KKPIKSSSTR TATDDSDQAI MKQEGVLKKV PAPCSGCLDG
KTFTFSGVLE SLSREDAVHL VKSCGGSVAN SITRSTKFLV IGATLEQGGN VTDGSKYKEA
VAKNVRILTQ NEFYNLITEA ATAQQAQDLA AEKAKIKAEA GGKTASTKGK QKLSSSINDE
LWTDKYKPQT LDHMIGNIEL GRKLKTWLLD WEAMHVKGTK KVPFSTKLSE NRGAKTVLLS
GPPGIGKTTI ANLVAREVGF ECTELNASDT RSKKMLQTGL KDVLGTQALQ FGAPTGKSKE
KMHLARRVII MDEVDGMSGG DRGGTAELIQ LIKKSKTPII CICNDRQSQK VRSLANHSFD
LRMRRPTKIQ IGKRLMEIGL KEGLNMEKNA IEEAAERCGN DIRQLLTQMQ RWRLTTTKIT
YADMVNPSSQ HNKDESLRLN PFSATQQIFQ RDLSFDARNE AYFVDYDLMP LMVQENYIQS
IMNNRRSSDE NLEAAMHASE FISESDLLNT YVRVEQRWDL LTKQAAMNVG ACVYSAGFIG
HPEFSKYVHA RVAWHDCTYE RLCFLVDGWE RTRRHPSRSG CSVNCQSECD HTPLVPEKSF
VSTTCRT
//
