ID   W2WCU4_PHYPR            Unreviewed;       527 AA.
AC   W2WCU4;
DT   19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT   19-MAR-2014, sequence version 1.
DT   27-MAR-2024, entry version 29.
DE   RecName: Full=Nop domain-containing protein {ECO:0000259|PROSITE:PS51358};
GN   ORFNames=F441_16277 {ECO:0000313|EMBL:ETP07439.1};
OS   Phytophthora parasitica CJ01A1.
OC   Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC   Phytophthora.
OX   NCBI_TaxID=1317063 {ECO:0000313|EMBL:ETP07439.1, ECO:0000313|Proteomes:UP000018958};
RN   [1] {ECO:0000313|EMBL:ETP07439.1, ECO:0000313|Proteomes:UP000018958}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CJ01A1 {ECO:0000313|EMBL:ETP07439.1,
RC   ECO:0000313|Proteomes:UP000018958};
RG   The Broad Institute Genomics Platform;
RA   Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA   Machado M., Johnson C.S., Walker B., Young S.K., Zeng Q., Gargeya S.,
RA   Fitzgerald M., Haas B., Abouelleil A., Allen A.W., Alvarado L.,
RA   Arachchi H.M., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J.,
RA   Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Ireland A.,
RA   Larimer J., McCowan C., Murphy C., Pearson M., Poon T.W., Priest M.,
RA   Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C.,
RA   Birren B.;
RT   "The Genome Sequence of Phytophthora parasitica CJ01A1.";
RL   Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the PRP31 family.
CC       {ECO:0000256|ARBA:ARBA00005572}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ETP07439.1}.
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DR   EMBL; ANIX01003266; ETP07439.1; -; Genomic_DNA.
DR   AlphaFoldDB; W2WCU4; -.
DR   EnsemblProtists; ETP07439; ETP07439; F441_16277.
DR   Proteomes; UP000018958; Unassembled WGS sequence.
DR   GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR   GO; GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0000244; P:spliceosomal tri-snRNP complex assembly; IEA:InterPro.
DR   Gene3D; 1.10.287.4070; -; 1.
DR   Gene3D; 1.10.246.90; Nop domain; 1.
DR   InterPro; IPR042239; Nop_C.
DR   InterPro; IPR002687; Nop_dom.
DR   InterPro; IPR036070; Nop_dom_sf.
DR   InterPro; IPR012976; NOSIC.
DR   InterPro; IPR027105; Prp31.
DR   InterPro; IPR019175; Prp31_C.
DR   PANTHER; PTHR13904; PRE-MRNA SPLICING FACTOR PRP31; 1.
DR   PANTHER; PTHR13904:SF0; U4_U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP31; 1.
DR   Pfam; PF01798; Nop; 1.
DR   Pfam; PF09785; Prp31_C; 1.
DR   SMART; SM00931; NOSIC; 1.
DR   SUPFAM; SSF89124; Nop domain; 1.
DR   PROSITE; PS51358; NOP; 1.
PE   3: Inferred from homology;
KW   mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW   mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW   Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT   DOMAIN          256..376
FT                   /note="Nop"
FT                   /evidence="ECO:0000259|PROSITE:PS51358"
FT   REGION          1..80
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          370..405
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        21..38
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        49..80
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        370..395
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   527 AA;  57318 MW;  FAB3EDF1FD6D60CB CRC64;
     MSTLADSFLD DLDELSGGSS DEEDTPTSSY TPGGASSADA ETNGDDDDEK MPDAAQSRPA
     KRKRENDGEE KNEDLAESLR SSVKQRGIAA VATLKRSPKY LAHVQKIQEY VDVDDASVTA
     EPKPLEEGSA EYELVVTSND LMVQIDDEIE AIHRFIADIY AAKFPELDSL VPNALDYARV
     VKVIGNEMDL TLVEELPKLL PSSAVIGISV TGSGTSGKPL SLEDLKTCME ACDELLSLDK
     DKNMILRFVE SRMKYLAPNV SQLVGTRIAA QLIGLAGGVA QLARIPSCNL QVLGQEKKVL
     SGFSSAAALK HTGVLFFSDL VQSVPPYLRM KACRAVAGKL ALMARVDSQP HQNDTEGLVG
     ARFRTELVGK MEKWQEPQKA KTKKALPIPD EKPRRKRGGK RYRKMKERLQ MTDVRREMNR
     QSFATADEEY GDNAMGITSG RLGQEGSGNL RIMRKEQKQS SKKLRAANFA ASSASKPPLS
     GLASSLAFTP VQGIELMNPE AAKARVAEAN KKYFSAASGF VSVVKKP
//