ID W3RNL4_9BRAD Unreviewed; 233 AA.
AC W3RNL4;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE SubName: Full=GntR family transcriptional regulator {ECO:0000313|EMBL:ETR78721.1};
GN ORFNames=X566_14455 {ECO:0000313|EMBL:ETR78721.1};
OS Afipia sp. P52-10.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Afipia.
OX NCBI_TaxID=1429916 {ECO:0000313|EMBL:ETR78721.1, ECO:0000313|Proteomes:UP000018975};
RN [1] {ECO:0000313|Proteomes:UP000018975}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=P52-10 {ECO:0000313|Proteomes:UP000018975};
RX PubMed=25874801;
RA Pickering B.S., Tyler S., Smith G., Burton L., Li M., Dallaire A.,
RA Weingartl H.;
RT "Identification of a novel afipia species isolated from an Indian flying
RT fox.";
RL PLoS ONE 10:E0121274-E0121274(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETR78721.1}.
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DR EMBL; AZSJ01000003; ETR78721.1; -; Genomic_DNA.
DR RefSeq; WP_034467180.1; NZ_AZSJ01000003.1.
DR AlphaFoldDB; W3RNL4; -.
DR STRING; 1429916.X566_14455; -.
DR PATRIC; fig|1429916.3.peg.2939; -.
DR eggNOG; COG1802; Bacteria.
DR OrthoDB; 9788098at2; -.
DR Proteomes; UP000018975; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 1.20.120.530; GntR ligand-binding domain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011711; GntR_C.
DR InterPro; IPR008920; TF_FadR/GntR_C.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR43537:SF42; GNTR FAMILY REGULATORY PROTEIN-RELATED; 1.
DR PANTHER; PTHR43537; TRANSCRIPTIONAL REGULATOR, GNTR FAMILY; 1.
DR Pfam; PF07729; FCD; 1.
DR Pfam; PF00392; GntR; 1.
DR SMART; SM00895; FCD; 1.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF48008; GntR ligand-binding domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000018975};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 10..76
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
SQ SEQUENCE 233 AA; 25505 MW; 5BE7D58CC9FACE02 CRC64;
MSALHPIAGT SLASEAFTKI VEAITSGEFE PGEKLSEAEL ARQLGISRGP LREALGRLEG
RLVTRTPRLG VSVITFSKAD LEQLFLVREA LEGMAARLAA ERATGRELDR LEEMLAHHAE
QPALAAGEAY VQRSTDEDFH FAIAKAARCE RLELLLLDGV YYQLRLNRLR SSTRPGRAQA
AFNEHKAILA ALQGRNPSNA EEAMRNHVRN ARFSTLAAAE DGYPSTSAKR SRG
//
