ID W4QAW9_9BACI Unreviewed; 675 AA.
AC W4QAW9;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 44.
DE SubName: Full=Sigma54 specific transcriptional regulator {ECO:0000313|EMBL:GAE28514.1};
GN ORFNames=JCM9140_4758 {ECO:0000313|EMBL:GAE28514.1};
OS Halalkalibacter wakoensis JCM 9140.
OC Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Halalkalibacter.
OX NCBI_TaxID=1236970 {ECO:0000313|EMBL:GAE28514.1, ECO:0000313|Proteomes:UP000018890};
RN [1] {ECO:0000313|EMBL:GAE28514.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 9140 {ECO:0000313|EMBL:GAE28514.1};
RA Yuki M., Oshima K., Suda W., Oshida Y., Kitamura K., Iida T., Hattori M.,
RA Ohkuma M.;
RT "Draft Genome Sequences of Three Alkaliphilic Bacillus Strains, Bacillus
RT wakoensis JCM 9140T, Bacillus akibai JCM 9157T, and Bacillus
RT hemicellulosilyticus JCM 9152T.";
RL Genome Announc. 2:e01258-13(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAE28514.1}.
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DR EMBL; BAUT01000116; GAE28514.1; -; Genomic_DNA.
DR RefSeq; WP_052002464.1; NZ_BAZN01000116.1.
DR AlphaFoldDB; W4QAW9; -.
DR STRING; 1236970.JCM9140_4758; -.
DR OrthoDB; 9771372at2; -.
DR Proteomes; UP000018890; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000018890};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 340..570
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 675 AA; 76243 MW; 31CFAD7F9A3566D0 CRC64;
MNNGLFSYQY FANNLELERK KLQEVWEKTV VQKRQDLDNK NIRSATLDSW SRCMRQGVDP
IQTTAPIISC DVQVKEAFSH SKLYRYLVPY IESLTGMVNE TNSLFVVTSS KGEIAHIEGN
FSLRSKAEQM NFVLGSSWAE RDTGTNAIGA VVATKLPHQI FAAEHFCQRV HDWSCAAAPI
KDPATDNVLG IVNLTGQWRD LHPYAISMVS TLVRAIENDL GRDVEVNRFK LLARYSEVAT
GSPNVYVAAV DLRGRVLKAD PLLYEKKWVA ENHMLKDVQI KTNLELKEES WEVQREDGRW
RVFSIPYIDQ RQPVGCIVYI VPPNSQLSNS NSTKYSFNSM IGHSNAFVAS MKDAMAASGT
DLPVLIEGES GTGKELVAQS IHQASSRANN PFIAVNCGAL PKELGISELF GFEGGTFTGA
AKNGRIGKFE QAQGGTIFLD EIGEMPLDMQ TYLLRVLEEN EVVVLGGKKA KPLDVRVIAA
TNRNLITAVQ EGKFRQDLFY RLNILCIKVP PLRKRPEDIP LLLDFYLKKA CKELRRTSIE
INKSALRVLQ LYGWPGNVRE LRNIVYRMVT NSTGSLIEAS EIPIEIRETL IHDVSYLDKS
KKETPLQQKN QTVPFEREPD IVDEPTIKDT ELKMILKELN KQQGNVTKAA RRLGIHRSTI
YRKLRFLQMS ERFDK
//
