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Database: UniProt
Entry: W5D4V6_WHEAT
LinkDB: W5D4V6_WHEAT
Original site: W5D4V6_WHEAT 
ID   W5D4V6_WHEAT            Unreviewed;       555 AA.
AC   W5D4V6;
DT   19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT   19-MAR-2014, sequence version 1.
DT   24-JAN-2024, entry version 57.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=CFC21_042973 {ECO:0000313|EMBL:KAF7031682.1},
GN   TRAES_3BF093200050CFD_c1 {ECO:0000313|EMBL:CDM80099.1};
OS   Triticum aestivum (Wheat).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX   NCBI_TaxID=4565 {ECO:0000313|EMBL:CDM80099.1};
RN   [1] {ECO:0000313|EMBL:CDM80099.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=25035497; DOI=10.1126/science.1249721;
RA   Choulet F., Alberti A., Theil S., Glover N., Barbe V., Daron J.,
RA   Pingault L., Sourdille P., Couloux A., Paux E., Leroy P., Mangenot S.,
RA   Guilhot N., Le Gouis J., Balfourier F., Alaux M., Jamilloux V., Poulain J.,
RA   Durand C., Bellec A., Gaspin C., Safar J., Dolezel J., Rogers J.,
RA   Vandepoele K., Aury J.M., Mayer K., Berges H., Quesneville H., Wincker P.,
RA   Feuillet C.;
RT   "Structural and functional partitioning of bread wheat chromosome 3B.";
RL   Science 345:1249721-1249721(2014).
RN   [2] {ECO:0000313|EMBL:KAF7031682.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Leaf {ECO:0000313|EMBL:KAF7031682.1};
RX   PubMed=29069494;
RA   Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT   "The first near-complete assembly of the hexaploid bread wheat genome,
RT   Triticum aestivum.";
RL   Gigascience 6:1-7(2017).
RN   [3] {ECO:0000313|EnsemblPlants:TraesCS3B02G403000.1.cds1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Chinese Spring
RC   {ECO:0000313|EnsemblPlants:TraesCS3B02G403000.1.cds1};
RX   PubMed=30115783; DOI=10.1126/science.aar7191;
RG   International wheat genome sequencing consortium (IWGSC);
RT   "Shifting the limits in wheat research and breeding using a fully annotated
RT   reference genome.";
RL   Science 361:EAAR7191-EAAR7191(2018).
RN   [4] {ECO:0000313|EnsemblPlants:TraesCS3B02G403000.1.cds1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (OCT-2018) to UniProtKB.
RN   [5] {ECO:0000313|EMBL:KAF7031682.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Leaf {ECO:0000313|EMBL:KAF7031682.1};
RA   Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT   "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT   aestivum) genome.";
RL   Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; HG670306; CDM80099.1; -; Genomic_DNA.
DR   EMBL; CM022218; KAF7031682.1; -; Genomic_DNA.
DR   SMR; W5D4V6; -.
DR   STRING; 4565.W5D4V6; -.
DR   PaxDb; 4565-Traes_3B_DA910B9F7-1; -.
DR   EnsemblPlants; TraesCS3B02G403000.1; TraesCS3B02G403000.1.cds1; TraesCS3B02G403000.
DR   Gramene; TraesCS3B02G403000.1; TraesCS3B02G403000.1.cds1; TraesCS3B02G403000.
DR   Gramene; TraesCS3B03G1004800.1; TraesCS3B03G1004800.1.CDS1; TraesCS3B03G1004800.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_0_1_1; -.
DR   OMA; WAKQSHA; -.
DR   OrthoDB; 1209797at2759; -.
DR   Proteomes; UP000019116; Chromosome 3B.
DR   Proteomes; UP000815260; Chromosome 3B.
DR   GO; GO:0005739; C:mitochondrion; IEA:GOC.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:1900864; P:mitochondrial RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 4.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 2.
DR   Pfam; PF13041; PPR_2; 2.
DR   PROSITE; PS51375; PPR; 5.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}; Signal {ECO:0000256|SAM:SignalP};
KW   Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT   SIGNAL          1..22
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           23..555
FT                   /note="Pentacotripeptide-repeat region of PRORP domain-
FT                   containing protein"
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5014594707"
FT   REPEAT          69..103
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          170..204
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          271..305
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          372..406
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          407..437
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   555 AA;  61709 MW;  5760BE7B2FCF791B CRC64;
     MRRKLALLAA AAGGAALPLS WAKQSHARLI VASPRIPDDL RLCLLRSYAA HGEFASAHRL
     LEEAPRPASP LLYNAVIRAH SRRLDLPTAL AFFASMRRSA TPPDAHTFAC VLRACADCDR
     PAAAKILHGL ALSSGWSSHP IVGSALVSAY SKFLFVDSAR RVFDGLREPD LVLWNSMMSG
     YGYREMWLEG IQLFSAMRRA GEEPDGYSMV SLLSSFWDPE ALAFGQAVHG VCIKGGYDSG
     HHVRSTLVSM YFRCGCVESG QTLFGSLLDA DLVTCSSLIT GQLQTGKYDE SFDLFREMCY
     FGRRPDSILI ASLLSACAST ATISYSKEIH CYAVRVGADK DIKVSSSLMD AYAKCGFAEL
     GYLVFRQIPK KNSVMYNMVI SNLGSHGFAM KAIEVHDEMV RDKLRPDGAT FSALLAACCH
     AGLLDDGWKL FRRMRDEFHI VVQMQHYVYM VRLLATFNQL KEAYDLIQTM PMPPDCGVWG
     ALLWGCCLHR DSSLGRAVAE KLCELYPDKA SYKIMLSNLY ASEEMWWDAE EVRTEMLKEY
     MNKNTGISWV GDTRK
//
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