ID W5D4V6_WHEAT Unreviewed; 555 AA.
AC W5D4V6;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 57.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CFC21_042973 {ECO:0000313|EMBL:KAF7031682.1},
GN TRAES_3BF093200050CFD_c1 {ECO:0000313|EMBL:CDM80099.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EMBL:CDM80099.1};
RN [1] {ECO:0000313|EMBL:CDM80099.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=25035497; DOI=10.1126/science.1249721;
RA Choulet F., Alberti A., Theil S., Glover N., Barbe V., Daron J.,
RA Pingault L., Sourdille P., Couloux A., Paux E., Leroy P., Mangenot S.,
RA Guilhot N., Le Gouis J., Balfourier F., Alaux M., Jamilloux V., Poulain J.,
RA Durand C., Bellec A., Gaspin C., Safar J., Dolezel J., Rogers J.,
RA Vandepoele K., Aury J.M., Mayer K., Berges H., Quesneville H., Wincker P.,
RA Feuillet C.;
RT "Structural and functional partitioning of bread wheat chromosome 3B.";
RL Science 345:1249721-1249721(2014).
RN [2] {ECO:0000313|EMBL:KAF7031682.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7031682.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS3B02G403000.1.cds1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS3B02G403000.1.cds1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [4] {ECO:0000313|EnsemblPlants:TraesCS3B02G403000.1.cds1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [5] {ECO:0000313|EMBL:KAF7031682.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7031682.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HG670306; CDM80099.1; -; Genomic_DNA.
DR EMBL; CM022218; KAF7031682.1; -; Genomic_DNA.
DR SMR; W5D4V6; -.
DR STRING; 4565.W5D4V6; -.
DR PaxDb; 4565-Traes_3B_DA910B9F7-1; -.
DR EnsemblPlants; TraesCS3B02G403000.1; TraesCS3B02G403000.1.cds1; TraesCS3B02G403000.
DR Gramene; TraesCS3B02G403000.1; TraesCS3B02G403000.1.cds1; TraesCS3B02G403000.
DR Gramene; TraesCS3B03G1004800.1; TraesCS3B03G1004800.1.CDS1; TraesCS3B03G1004800.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_1_1; -.
DR OMA; WAKQSHA; -.
DR OrthoDB; 1209797at2759; -.
DR Proteomes; UP000019116; Chromosome 3B.
DR Proteomes; UP000815260; Chromosome 3B.
DR GO; GO:0005739; C:mitochondrion; IEA:GOC.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:1900864; P:mitochondrial RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}; Signal {ECO:0000256|SAM:SignalP};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT SIGNAL 1..22
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 23..555
FT /note="Pentacotripeptide-repeat region of PRORP domain-
FT containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5014594707"
FT REPEAT 69..103
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 170..204
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 271..305
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 372..406
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 407..437
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 555 AA; 61709 MW; 5760BE7B2FCF791B CRC64;
MRRKLALLAA AAGGAALPLS WAKQSHARLI VASPRIPDDL RLCLLRSYAA HGEFASAHRL
LEEAPRPASP LLYNAVIRAH SRRLDLPTAL AFFASMRRSA TPPDAHTFAC VLRACADCDR
PAAAKILHGL ALSSGWSSHP IVGSALVSAY SKFLFVDSAR RVFDGLREPD LVLWNSMMSG
YGYREMWLEG IQLFSAMRRA GEEPDGYSMV SLLSSFWDPE ALAFGQAVHG VCIKGGYDSG
HHVRSTLVSM YFRCGCVESG QTLFGSLLDA DLVTCSSLIT GQLQTGKYDE SFDLFREMCY
FGRRPDSILI ASLLSACAST ATISYSKEIH CYAVRVGADK DIKVSSSLMD AYAKCGFAEL
GYLVFRQIPK KNSVMYNMVI SNLGSHGFAM KAIEVHDEMV RDKLRPDGAT FSALLAACCH
AGLLDDGWKL FRRMRDEFHI VVQMQHYVYM VRLLATFNQL KEAYDLIQTM PMPPDCGVWG
ALLWGCCLHR DSSLGRAVAE KLCELYPDKA SYKIMLSNLY ASEEMWWDAE EVRTEMLKEY
MNKNTGISWV GDTRK
//