ID W5NCS2_LEPOC Unreviewed; 1457 AA.
AC W5NCS2;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 24-JAN-2024, entry version 54.
DE SubName: Full=Neogenin 1 {ECO:0000313|Ensembl:ENSLOCP00000018431.1};
OS Lepisosteus oculatus (Spotted gar).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae;
OC Lepisosteus.
OX NCBI_TaxID=7918 {ECO:0000313|Ensembl:ENSLOCP00000018431.1, ECO:0000313|Proteomes:UP000018468};
RN [1] {ECO:0000313|Proteomes:UP000018468}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lander E.S., Lindblad-Toh K.;
RT "The Draft Genome of Lepisosteus oculatus.";
RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLOCP00000018431.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the immunoglobulin superfamily. DCC family.
CC {ECO:0000256|ARBA:ARBA00009588}.
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DR EMBL; AHAT01004875; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AHAT01004876; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AHAT01004877; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AHAT01004878; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AHAT01004879; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AHAT01004880; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR STRING; 7918.ENSLOCP00000018431; -.
DR Ensembl; ENSLOCT00000018463.1; ENSLOCP00000018431.1; ENSLOCG00000014953.1.
DR eggNOG; KOG4221; Eukaryota.
DR GeneTree; ENSGT00940000156684; -.
DR InParanoid; W5NCS2; -.
DR OMA; TSMSQPT; -.
DR Proteomes; UP000018468; Linkage group LG3.
DR Bgee; ENSLOCG00000014953; Expressed in zone of skin and 13 other cell types or tissues.
DR GO; GO:0044295; C:axonal growth cone; IBA:GO_Central.
DR GO; GO:0009986; C:cell surface; IBA:GO_Central.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0007411; P:axon guidance; IBA:GO_Central.
DR GO; GO:0098609; P:cell-cell adhesion; IBA:GO_Central.
DR GO; GO:0001764; P:neuron migration; IBA:GO_Central.
DR CDD; cd00063; FN3; 6.
DR CDD; cd00096; Ig; 1.
DR CDD; cd05722; IgI_1_Neogenin_like; 1.
DR CDD; cd05723; IgI_4_Neogenin_like; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 10.
DR InterPro; IPR003961; FN3_dom.
DR InterPro; IPR036116; FN3_sf.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR013098; Ig_I-set.
DR InterPro; IPR003599; Ig_sub.
DR InterPro; IPR003598; Ig_sub2.
DR InterPro; IPR010560; Neogenin_C.
DR PANTHER; PTHR44170:SF39; NEOGENIN 1A-RELATED; 1.
DR PANTHER; PTHR44170; PROTEIN SIDEKICK; 1.
DR Pfam; PF00041; fn3; 6.
DR Pfam; PF07679; I-set; 2.
DR Pfam; PF13895; Ig_2; 1.
DR Pfam; PF13927; Ig_3; 1.
DR Pfam; PF06583; Neogenin_C; 1.
DR PRINTS; PR00014; FNTYPEIII.
DR SMART; SM00060; FN3; 6.
DR SMART; SM00409; IG; 4.
DR SMART; SM00408; IGc2; 4.
DR SUPFAM; SSF49265; Fibronectin type III; 3.
DR SUPFAM; SSF48726; Immunoglobulin; 4.
DR PROSITE; PS50853; FN3; 6.
DR PROSITE; PS50835; IG_LIKE; 4.
PE 3: Inferred from homology;
KW Immunoglobulin domain {ECO:0000256|ARBA:ARBA00023319};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000018468};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 1103..1127
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 24..112
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 124..210
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 215..307
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 312..397
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 433..526
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 532..622
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 629..723
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 730..823
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 851..947
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 952..1049
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 408..435
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1066..1094
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1132..1159
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1186..1224
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1257..1352
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1186..1209
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1210..1224
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1457 AA; 158572 MW; E658AA2FD8F46C34 CRC64;
PARLTCSLSS RPPPPDSGAR HFTPFWFSEE PSDTLAVRGS PALLNCSAQS DGPVRLEWKK
DGTFLNLASD DRRQLLPDGS LLVGSVVHSK HNKPDEGVYQ CVASVDSLGT ISSRTARLAV
AGQPRFTSQP EAASVHQGDS EVMSCEVNSD LVPFTRWELN REPVELNKRV IQLPSGALVI
SNASESDTGL YRCVVENVGP VKTSEEAELQ VLLEPEADRR LEFLRQPVPV TKVIGQSVLL
PCVVTGYPLP TVRWMVGDKL IEEREGKFET VGGGSLQIVN LTEEDAGIYS CLADNGNETI
EAQAELTMQA PPQFLKKPAN IYAYESMDIV FECEVMGTPP PTVKWVKNGD AVIPSDYFKI
IKEHNLQVLG LVKSDEGFYQ CLAENDAGNV QASAQLIILE RDVAIPTPPP TSLTSATTDH
VAPGSGGGPT PSAPRDVVAS LVSTRFIKLT WRPPAEPHGD DITYSVFYSL EGTSRERIEN
TTRPGELQVT IQSLMPDTKY SFRVAAHNRN GLGESSTPLR VATQPEVQVP GPAPNLQAIA
TSPTSIAVSW EVPLTGNGEI QAYKLYYMEK GTDSEQDIDV GGLSYTMNGL KKYTKYNFRV
VAYNKHGPGV STADVEAQTL SDGSVPSAPP QNFSLEVRNS KGIMVQWQPP PPGTHNGEII
GYKIRYRKGA RKSEISETTV GVLLSQLIEG LERGTEYTFR VAAMTGNGTG PPTEWATAET
FESDLDETRV PDIPSSLHVR PLVTSIVVSW TPPENQDIVV RGYTIGYGIG SPHAQTIKVD
YKQRYYTIEN LDPSSHYVIT LKAFNNIGEG IPVYESAATR PLSDPIDPDV DLYDLFNAPY
TPVPDPSPMM PPVGVQASVL SHDTIKVTWA DSSLPKNQKI TDARYYSVRW KTNIPANTKF
KTANTTNLSY MVTGLKPNTL YEFSVKVTKG RRTSTWSMTA HGTTFETIPS SPPKDVTVVS
KEGRPRTIIV NWQPPSEANG KITGYIIYYS TEVNAEVHDW VIEPVVGNRL THQIQDLTLD
TPYYFKIQAR NSKGMGPMSE AVQFRTPKAE SSDKMANDQV IVGSGLKTLK PGGRPTSPDH
GVGSPHGKTG FSGSPTSSLD SSILLIIIIS VGAFTIIIVV VVAVICTRRT TSQQKKKRAA
CKSANGSHKY KGNSKDLKPP DLWIHHERLE LKPIDKSPEP NPVMTDTPIP RTSQDITPVD
SAADNTIHQR RSSCRGHESE DSMSTLAGRR GMRPKMMMPF DAQPPQPVIS AHPIHSLDNH
HHHYHSGSLA SPTRSHLHHQ INPRPLATPI SHVDRAHSAE SVRNTPSADP LPVPVQPACA
VDHPEPDSGA SFLSSAPEEE SYNPPTAHVR PTHPLKSFAV PAVPTPGTSF ESPALPSTPL
LTQTGPASQV HSVKTASIGT LGRTRSPMPV IVPSAPDVPE TSKMLEDVES NYEADELSEE
MAHLEGLMKD LNAITTA
//