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Database: UniProt
Entry: W5NCS2_LEPOC
LinkDB: W5NCS2_LEPOC
Original site: W5NCS2_LEPOC 
ID   W5NCS2_LEPOC            Unreviewed;      1457 AA.
AC   W5NCS2;
DT   16-APR-2014, integrated into UniProtKB/TrEMBL.
DT   16-APR-2014, sequence version 1.
DT   24-JAN-2024, entry version 54.
DE   SubName: Full=Neogenin 1 {ECO:0000313|Ensembl:ENSLOCP00000018431.1};
OS   Lepisosteus oculatus (Spotted gar).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae;
OC   Lepisosteus.
OX   NCBI_TaxID=7918 {ECO:0000313|Ensembl:ENSLOCP00000018431.1, ECO:0000313|Proteomes:UP000018468};
RN   [1] {ECO:0000313|Proteomes:UP000018468}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA   MacCallum I., Young S., Walker B.J., Lander E.S., Lindblad-Toh K.;
RT   "The Draft Genome of Lepisosteus oculatus.";
RL   Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSLOCP00000018431.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the immunoglobulin superfamily. DCC family.
CC       {ECO:0000256|ARBA:ARBA00009588}.
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DR   EMBL; AHAT01004875; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AHAT01004876; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AHAT01004877; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AHAT01004878; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AHAT01004879; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AHAT01004880; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   STRING; 7918.ENSLOCP00000018431; -.
DR   Ensembl; ENSLOCT00000018463.1; ENSLOCP00000018431.1; ENSLOCG00000014953.1.
DR   eggNOG; KOG4221; Eukaryota.
DR   GeneTree; ENSGT00940000156684; -.
DR   InParanoid; W5NCS2; -.
DR   OMA; TSMSQPT; -.
DR   Proteomes; UP000018468; Linkage group LG3.
DR   Bgee; ENSLOCG00000014953; Expressed in zone of skin and 13 other cell types or tissues.
DR   GO; GO:0044295; C:axonal growth cone; IBA:GO_Central.
DR   GO; GO:0009986; C:cell surface; IBA:GO_Central.
DR   GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR   GO; GO:0007411; P:axon guidance; IBA:GO_Central.
DR   GO; GO:0098609; P:cell-cell adhesion; IBA:GO_Central.
DR   GO; GO:0001764; P:neuron migration; IBA:GO_Central.
DR   CDD; cd00063; FN3; 6.
DR   CDD; cd00096; Ig; 1.
DR   CDD; cd05722; IgI_1_Neogenin_like; 1.
DR   CDD; cd05723; IgI_4_Neogenin_like; 1.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 10.
DR   InterPro; IPR003961; FN3_dom.
DR   InterPro; IPR036116; FN3_sf.
DR   InterPro; IPR007110; Ig-like_dom.
DR   InterPro; IPR036179; Ig-like_dom_sf.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR013098; Ig_I-set.
DR   InterPro; IPR003599; Ig_sub.
DR   InterPro; IPR003598; Ig_sub2.
DR   InterPro; IPR010560; Neogenin_C.
DR   PANTHER; PTHR44170:SF39; NEOGENIN 1A-RELATED; 1.
DR   PANTHER; PTHR44170; PROTEIN SIDEKICK; 1.
DR   Pfam; PF00041; fn3; 6.
DR   Pfam; PF07679; I-set; 2.
DR   Pfam; PF13895; Ig_2; 1.
DR   Pfam; PF13927; Ig_3; 1.
DR   Pfam; PF06583; Neogenin_C; 1.
DR   PRINTS; PR00014; FNTYPEIII.
DR   SMART; SM00060; FN3; 6.
DR   SMART; SM00409; IG; 4.
DR   SMART; SM00408; IGc2; 4.
DR   SUPFAM; SSF49265; Fibronectin type III; 3.
DR   SUPFAM; SSF48726; Immunoglobulin; 4.
DR   PROSITE; PS50853; FN3; 6.
DR   PROSITE; PS50835; IG_LIKE; 4.
PE   3: Inferred from homology;
KW   Immunoglobulin domain {ECO:0000256|ARBA:ARBA00023319};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000018468};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        1103..1127
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          24..112
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
FT   DOMAIN          124..210
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
FT   DOMAIN          215..307
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
FT   DOMAIN          312..397
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
FT   DOMAIN          433..526
FT                   /note="Fibronectin type-III"
FT                   /evidence="ECO:0000259|PROSITE:PS50853"
FT   DOMAIN          532..622
FT                   /note="Fibronectin type-III"
FT                   /evidence="ECO:0000259|PROSITE:PS50853"
FT   DOMAIN          629..723
FT                   /note="Fibronectin type-III"
FT                   /evidence="ECO:0000259|PROSITE:PS50853"
FT   DOMAIN          730..823
FT                   /note="Fibronectin type-III"
FT                   /evidence="ECO:0000259|PROSITE:PS50853"
FT   DOMAIN          851..947
FT                   /note="Fibronectin type-III"
FT                   /evidence="ECO:0000259|PROSITE:PS50853"
FT   DOMAIN          952..1049
FT                   /note="Fibronectin type-III"
FT                   /evidence="ECO:0000259|PROSITE:PS50853"
FT   REGION          1..20
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          408..435
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1066..1094
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1132..1159
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1186..1224
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1257..1352
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1186..1209
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1210..1224
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1457 AA;  158572 MW;  E658AA2FD8F46C34 CRC64;
     PARLTCSLSS RPPPPDSGAR HFTPFWFSEE PSDTLAVRGS PALLNCSAQS DGPVRLEWKK
     DGTFLNLASD DRRQLLPDGS LLVGSVVHSK HNKPDEGVYQ CVASVDSLGT ISSRTARLAV
     AGQPRFTSQP EAASVHQGDS EVMSCEVNSD LVPFTRWELN REPVELNKRV IQLPSGALVI
     SNASESDTGL YRCVVENVGP VKTSEEAELQ VLLEPEADRR LEFLRQPVPV TKVIGQSVLL
     PCVVTGYPLP TVRWMVGDKL IEEREGKFET VGGGSLQIVN LTEEDAGIYS CLADNGNETI
     EAQAELTMQA PPQFLKKPAN IYAYESMDIV FECEVMGTPP PTVKWVKNGD AVIPSDYFKI
     IKEHNLQVLG LVKSDEGFYQ CLAENDAGNV QASAQLIILE RDVAIPTPPP TSLTSATTDH
     VAPGSGGGPT PSAPRDVVAS LVSTRFIKLT WRPPAEPHGD DITYSVFYSL EGTSRERIEN
     TTRPGELQVT IQSLMPDTKY SFRVAAHNRN GLGESSTPLR VATQPEVQVP GPAPNLQAIA
     TSPTSIAVSW EVPLTGNGEI QAYKLYYMEK GTDSEQDIDV GGLSYTMNGL KKYTKYNFRV
     VAYNKHGPGV STADVEAQTL SDGSVPSAPP QNFSLEVRNS KGIMVQWQPP PPGTHNGEII
     GYKIRYRKGA RKSEISETTV GVLLSQLIEG LERGTEYTFR VAAMTGNGTG PPTEWATAET
     FESDLDETRV PDIPSSLHVR PLVTSIVVSW TPPENQDIVV RGYTIGYGIG SPHAQTIKVD
     YKQRYYTIEN LDPSSHYVIT LKAFNNIGEG IPVYESAATR PLSDPIDPDV DLYDLFNAPY
     TPVPDPSPMM PPVGVQASVL SHDTIKVTWA DSSLPKNQKI TDARYYSVRW KTNIPANTKF
     KTANTTNLSY MVTGLKPNTL YEFSVKVTKG RRTSTWSMTA HGTTFETIPS SPPKDVTVVS
     KEGRPRTIIV NWQPPSEANG KITGYIIYYS TEVNAEVHDW VIEPVVGNRL THQIQDLTLD
     TPYYFKIQAR NSKGMGPMSE AVQFRTPKAE SSDKMANDQV IVGSGLKTLK PGGRPTSPDH
     GVGSPHGKTG FSGSPTSSLD SSILLIIIIS VGAFTIIIVV VVAVICTRRT TSQQKKKRAA
     CKSANGSHKY KGNSKDLKPP DLWIHHERLE LKPIDKSPEP NPVMTDTPIP RTSQDITPVD
     SAADNTIHQR RSSCRGHESE DSMSTLAGRR GMRPKMMMPF DAQPPQPVIS AHPIHSLDNH
     HHHYHSGSLA SPTRSHLHHQ INPRPLATPI SHVDRAHSAE SVRNTPSADP LPVPVQPACA
     VDHPEPDSGA SFLSSAPEEE SYNPPTAHVR PTHPLKSFAV PAVPTPGTSF ESPALPSTPL
     LTQTGPASQV HSVKTASIGT LGRTRSPMPV IVPSAPDVPE TSKMLEDVES NYEADELSEE
     MAHLEGLMKD LNAITTA
//
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