GenomeNet

Database: UniProt
Entry: W7FIJ4_PLAFA
LinkDB: W7FIJ4_PLAFA
Original site: W7FIJ4_PLAFA 
ID   W7FIJ4_PLAFA            Unreviewed;       491 AA.
AC   W7FIJ4;
DT   16-APR-2014, integrated into UniProtKB/TrEMBL.
DT   16-APR-2014, sequence version 1.
DT   13-SEP-2023, entry version 33.
DE   RecName: Full=RRM domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=PFAG_05084 {ECO:0000313|EMBL:EUT79591.1};
OS   Plasmodium falciparum Santa Lucia.
OC   Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida;
OC   Plasmodiidae; Plasmodium; Plasmodium (Laverania).
OX   NCBI_TaxID=478859 {ECO:0000313|EMBL:EUT79591.1};
RN   [1] {ECO:0000313|EMBL:EUT79591.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Santa Lucia {ECO:0000313|EMBL:EUT79591.1};
RG   The Broad Institute Genome Sequencing Platform;
RG   The Broad Institute Genome Sequencing Center for Infectious Disease;
RA   Neafsey D., Cheeseman I., Volkman S., Adams J., Walker B., Young S.K.,
RA   Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L.,
RA   Arachchi H.M., Berlin A.M., Chapman S.B., Dewar J., Goldberg J., Griggs A.,
RA   Gujja S., Hansen M., Howarth C., Imamovic A., Larimer J., McCowan C.,
RA   Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T.,
RA   Sisk P., Sykes S., Wortman J., Nusbaum C., Birren B.;
RT   "The Genome Sequence of Plasmodium falciparum Santa Lucia.";
RL   Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; KE123510; EUT79591.1; -; Genomic_DNA.
DR   AlphaFoldDB; W7FIJ4; -.
DR   EnsemblProtists; EUT79591; EUT79591; PFAG_05084.
DR   Proteomes; UP000030666; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   Gene3D; 3.30.70.330; -; 1.
DR   Gene3D; 1.10.10.790; Surp module; 1.
DR   InterPro; IPR006569; CID_dom.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   InterPro; IPR003954; RRM_dom_euk.
DR   InterPro; IPR000061; Surp.
DR   InterPro; IPR035967; SWAP/Surp_sf.
DR   PANTHER; PTHR23140; RNA PROCESSING PROTEIN LD23810P; 1.
DR   PANTHER; PTHR23140:SF0; U2 SNRNP-ASSOCIATED SURP MOTIF-CONTAINING PROTEIN; 1.
DR   Pfam; PF00076; RRM_1; 1.
DR   Pfam; PF01805; Surp; 1.
DR   SMART; SM00360; RRM; 1.
DR   SMART; SM00361; RRM_1; 1.
DR   SMART; SM00648; SWAP; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   SUPFAM; SSF109905; Surp module (SWAP domain); 1.
DR   PROSITE; PS51391; CID; 1.
DR   PROSITE; PS50102; RRM; 1.
DR   PROSITE; PS50128; SURP; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW   Signal {ECO:0000256|SAM:SignalP}.
FT   SIGNAL          1..18
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           19..491
FT                   /note="RRM domain-containing protein"
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5004892842"
FT   DOMAIN          206..287
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          332..374
FT                   /note="SURP motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50128"
FT   DOMAIN          430..491
FT                   /note="CID"
FT                   /evidence="ECO:0000259|PROSITE:PS51391"
FT   COILED          156..192
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   491 AA;  58495 MW;  27EC494976B9D851 CRC64;
     MWNCWAIYNS VFVNGLLCLL CNMKINYIDV NKSEEENDEE NIDGHKIQYY DDIKRYPLSL
     RRNAYMYFKK NDDEINKLCL QRGLYYNEHF TKQKKIKYLL LYDNFCTNNN KIFLNSYVFQ
     GDNNKNVTSH GESRDIQNKW ISFFFFKKKK KEIKLKQKIL DERKSLKEKS QLAKSEEEKI
     KINKKITEIE QNENLLSYIP RKEKIANLYL GNLSPEVTEE YLCQKFGKFG KVNSVKIMYP
     RKDEDKKKAR ISGFVCFENI EDAENAKDAL DGVEMCGNII RIGWSKAIPK FGYNTKNEIS
     NYNMDKYNTY NNVNVNKKVI IIIPDDKKTK RIIDLLAKYV TEEGYSFEET IKEKEKDNPI
     FHFLFESSDL FYYYKWRVFS FAQGDSYKNW RTDPFHIFSN GYLYVPPAIE KKNKGLLIKR
     KRGRNKRRHI DEKKKNKLIN ILSTLNKKRV SICRAMIFCT RHSDYSLDII KIISNFLTDV
     KYDLLKKVKV G
//
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