ID W7TDC7_9STRA Unreviewed; 596 AA.
AC W7TDC7;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Ribonuclease h {ECO:0000313|EMBL:EWM24965.1};
GN ORFNames=Naga_100148g13 {ECO:0000313|EMBL:EWM24965.1};
OS Nannochloropsis gaditana.
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Eustigmatophyceae;
OC Eustigmatales; Monodopsidaceae; Nannochloropsis.
OX NCBI_TaxID=72520 {ECO:0000313|EMBL:EWM24965.1, ECO:0000313|Proteomes:UP000019335};
RN [1] {ECO:0000313|EMBL:EWM24965.1, ECO:0000313|Proteomes:UP000019335}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B-31 {ECO:0000313|EMBL:EWM24965.1,
RC ECO:0000313|Proteomes:UP000019335};
RX PubMed=23966634; DOI=10.1093/mp/sst120;
RA Corteggiani Carpinelli E., Telatin A., Vitulo N., Forcato C., D'Angelo M.,
RA Schiavon R., Vezzi A., Giacometti G.M., Morosinotto T., Valle G.;
RT "Chromosome Scale Genome Assembly and Transcriptome Profiling of
RT Nannochloropsis gaditana in Nitrogen Depletion.";
RL Mol. Plant 7:323-335(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EWM24965.1}.
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DR EMBL; AZIL01001066; EWM24965.1; -; Genomic_DNA.
DR AlphaFoldDB; W7TDC7; -.
DR EnsemblProtists; EWM24965; EWM24965; Naga_100148g13.
DR OrthoDB; 463649at2759; -.
DR Proteomes; UP000019335; Chromosome 12.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR46387; POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN; 1.
DR PANTHER; PTHR46387:SF2; RNASE H DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000019335}.
FT DOMAIN 436..571
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
FT REGION 101..174
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 334..429
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 101..141
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 361..375
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 385..401
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 596 AA; 63547 MW; 7632D0B462E2C7D2 CRC64;
MTDGAIGPAA SPPCCSRISA QASKSQPGRA FLCRIITLLT LWKLGKGKMA SSVRSNGVAA
LNATPLANVH VQWRRRATAG RGHFRNTFGA FISTNLRTQS TIPMGTAAKK SSKLSGGTTP
PPHRPRSSSG GTLTGDTGHV NPYQPHSPFL DQPPAYSHLV FPGGDSKAAS KAHQHTNSYL
SHVLRLRLRT MDPSSLPPTS SLASPLLAAE GEIVIEQGPG SNARKPQPAW CTQVWVGLGR
GEREAVYGLI AQGVAAAQAL GLKNLQVAAP SAQVAREICG IDAVAESKGS KGSQGGDCSL
LTAHRKIQSM LKFFPFFSVS YRIVKEGHEE DMVLQPVPSL RGSQDGDEEE AHPMPPTTLT
PFRTPSTTGF GNGAEDSAVN SEEEDDEEGH ARSRHDASPD SPVHRASCPP SAPLPARSHV
SKVGTGMRSM SPIINPTAQY LLRFDGGSRG NPGPGGAGIV IYEQASLVQV RGLSLWLGSD
PPLTNNEAEY HGLVAGLRAA KTLGIRRICV EGDSQLVVRQ ILGVYKVRNE RLRVLYSEAM
ALKENFAEFS IRHVERSQNS DADALANRAL DEQCNGTFDS GGLRLDYSKE ADQVKE
//
