ID W7TTP2_9STRA Unreviewed; 720 AA.
AC W7TTP2;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN ORFNames=Naga_100033g25 {ECO:0000313|EMBL:EWM30580.1};
OS Nannochloropsis gaditana.
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Eustigmatophyceae;
OC Eustigmatales; Monodopsidaceae; Nannochloropsis.
OX NCBI_TaxID=72520 {ECO:0000313|EMBL:EWM30580.1, ECO:0000313|Proteomes:UP000019335};
RN [1] {ECO:0000313|EMBL:EWM30580.1, ECO:0000313|Proteomes:UP000019335}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B-31 {ECO:0000313|EMBL:EWM30580.1,
RC ECO:0000313|Proteomes:UP000019335};
RX PubMed=23966634; DOI=10.1093/mp/sst120;
RA Corteggiani Carpinelli E., Telatin A., Vitulo N., Forcato C., D'Angelo M.,
RA Schiavon R., Vezzi A., Giacometti G.M., Morosinotto T., Valle G.;
RT "Chromosome Scale Genome Assembly and Transcriptome Profiling of
RT Nannochloropsis gaditana in Nitrogen Depletion.";
RL Mol. Plant 7:323-335(2014).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001556};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EWM30580.1}.
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DR EMBL; AZIL01000030; EWM30580.1; -; Genomic_DNA.
DR AlphaFoldDB; W7TTP2; -.
DR EnsemblProtists; EWM30580; EWM30580; Naga_100033g25.
DR OrthoDB; 5488182at2759; -.
DR Proteomes; UP000019335; Chromosome 1.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF109; ATP-DEPENDENT RNA HELICASE DHX15 HOMOLOG; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:EWM30580.1};
KW Hydrolase {ECO:0000313|EMBL:EWM30580.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000019335}.
FT DOMAIN 79..243
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 269..448
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 720 AA; 80466 MW; ACAA021D35D0E93A CRC64;
MSKRGFDSGP MGGVGGEMGQ TRKQRIDLAD LRPGGSGNGG IAPVGGINPY TNRPYSSKYH
DILAKRRGLP VYEFLDDLLA KVKKNQVVVV EGETGSGKTT QIPQFLVDAG YTRDGYCVAC
TQPRRVAAMS IAKRVSEEMD VTMGEEVGYT IRFEDCSGPK TVLKFLTDGM LLREAMFDPM
LKKYKVIVLD EAHERTLATD VLMGLLKDVL QRRPDMKMVV MSATLDAEKF QKYFGDAPLL
RVPGRMFKVE VFYTPEPERD YVQAAIRTAL QIHLCEEPGD ILVFLTGEEE IEDACRKIRD
ESANYTSTHG ELAVYPLYSS LPPTQQQKIF SEAPGPQAPG APPGRKVVVS TNIAETSLTI
DGIVYVVDPG FSKQKIYNPR VRVESLLVSP ISRASAQQRS GRAGRTRPGK CFRLYTEKSF
QKDLQEQTYP EILRSQMSNV VLTLLKLGVE DLVHFDFMDP PAPETLARAL EELNYLGAIS
DEGLITQMGH RMSELPLDPQ AAKMVLSAPD FGCSNEILTI VSMLSVPQVF MRPKEAAKRA
DEAKAQFAHV DGDHLTLLNA YHAYKQHGGS KDWCWDNFIN VRSMGSAENV RTQLERMLTR
MEVPLLSPDF NAPDYYTRIK KALTAGGYMQ VAHLQKTGQY LTVKDHQIVS IHPSSVLDMK
PPWVLYADFV LTSKNYIRTV TAVECEWLLE IAPHYYDLAN FPKGETKNEL EACAKRLYQL
//