ID W7U5Y7_9STRA Unreviewed; 916 AA.
AC W7U5Y7;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=30s ribosomal protein s5 {ECO:0000313|EMBL:EWM28236.1};
GN ORFNames=Naga_100004g87 {ECO:0000313|EMBL:EWM28236.1};
OS Nannochloropsis gaditana.
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Eustigmatophyceae;
OC Eustigmatales; Monodopsidaceae; Nannochloropsis.
OX NCBI_TaxID=72520 {ECO:0000313|EMBL:EWM28236.1, ECO:0000313|Proteomes:UP000019335};
RN [1] {ECO:0000313|EMBL:EWM28236.1, ECO:0000313|Proteomes:UP000019335}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B-31 {ECO:0000313|EMBL:EWM28236.1,
RC ECO:0000313|Proteomes:UP000019335};
RX PubMed=23966634; DOI=10.1093/mp/sst120;
RA Corteggiani Carpinelli E., Telatin A., Vitulo N., Forcato C., D'Angelo M.,
RA Schiavon R., Vezzi A., Giacometti G.M., Morosinotto T., Valle G.;
RT "Chromosome Scale Genome Assembly and Transcriptome Profiling of
RT Nannochloropsis gaditana in Nitrogen Depletion.";
RL Mol. Plant 7:323-335(2014).
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS5 family.
CC {ECO:0000256|ARBA:ARBA00008945, ECO:0000256|RuleBase:RU003823}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EWM28236.1}.
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DR EMBL; AZIL01000352; EWM28236.1; -; Genomic_DNA.
DR AlphaFoldDB; W7U5Y7; -.
DR EnsemblProtists; EWM28236; EWM28236; Naga_100004g87.
DR OrthoDB; 90204at2759; -.
DR Proteomes; UP000019335; Chromosome 5.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-UniRule.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd00590; RRM_SF; 1.
DR Gene3D; 3.30.160.20; -; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR005324; Ribosomal_uS5_C.
DR InterPro; IPR013810; Ribosomal_uS5_N.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR48344; RIBOSOMAL PROTEIN S5 C-TERMINAL DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR48344:SF1; RIBOSOMAL PROTEIN S5 C-TERMINAL DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00333; Ribosomal_S5; 1.
DR Pfam; PF03719; Ribosomal_S5_C; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54768; dsRNA-binding domain-like; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50881; S5_DSRBD; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000019335};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|PROSITE-
KW ProRule:PRU00268};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|PROSITE-
KW ProRule:PRU00268}; RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 560..639
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 754..817
FT /note="S5 DRBM"
FT /evidence="ECO:0000259|PROSITE:PS50881"
FT REGION 185..213
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 252..306
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 685..741
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 286..306
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 916 AA; 99774 MW; 695BEB66D500ECD0 CRC64;
MMAVGRARSS SSLVGIARYS TWLHHHQALQ GQTWNMYTKS ATRASRRTPQ QRWLSSHPKA
ASLGYTLRVE GHFDEAKAQA LRPKDVVTLF GAFEPYNIVM RPPGAVGGGA KYQAKKGNSL
PPPPLVLATF QVPSLKYARE IAHSFHHDES WGDRITVHQE QETFPVFISG LPEGVSGSEL
KKQIDRAGAS DPKQRRVMGG SEPASESKGQ SKSLLTETAI DAYDTYAVFR CPDKYSSMGL
LQGSFQLAPV GPKARGNTGE KRLGAGAENG AGATEAEAQA EGNAGERMVE VEEAGQEGRG
EGDGEDARGV LSYAAWKTYP VRVNGLPGDA NEGEVMAVFS KYMPYDVEVL PVEASEAADG
NEGGTRGAYL RFARRIQGVE CASEMQDVSV RNNVLQVRRA WEKVYPLLIE AASGEGKVTA
DELEQVLAPL KRMKDSSLLD AELLEEGAAA VIRFGSQTGA EEGLGVLEAG AGSGRRKVRP
AWKDFRVDVR NLPLEVTQEE LREMVHLTTP SKVAVSLPVG GRYRTGSLSF TTREEADLAF
SQLSGTGLPD LKLRKAWAVY RLRVKGLPAD TREEDLREVL RGGYEPFQVD FPRSRKGNPK
GEAVLRFRTY DQLVAAIGRL YGRDSPMDEV ENQARWASAG EGMSFDDPAG SLEEELARLP
PSASSPLSTE TGMGLDALFD RHWKEERGPG EEGGGEAGME GGEAAASKPG GLGVAEPGAK
GSGKDVQEEE EEKEEESYAG RDVNPFAIHP EGKWVKMLVD TDTTQKIIKG GHILSYRALV
LVGNLKGCGG WGVGKGATLE EAQIRAYRAA KKNLIHIDLY RNRCITTDLY GKHNNCRIYI
QAGQPNRPHK EGRMINDMLR IMGVECGEAR SIGRRNPYSV VRALFHAISK HEGVEALSRK
RGRRLISVSK ARYLGL
//
