ID W7Y0C8_9BACT Unreviewed; 807 AA.
AC W7Y0C8;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE SubName: Full=Pyruvate dehydrogenase E1 component subunit beta {ECO:0000313|EMBL:GAF01397.1};
GN ORFNames=JCM21142_3 {ECO:0000313|EMBL:GAF01397.1};
OS Saccharicrinis fermentans DSM 9555 = JCM 21142.
OC Bacteria; Bacteroidota; Bacteroidia; Marinilabiliales; Marinilabiliaceae;
OC Saccharicrinis.
OX NCBI_TaxID=869213 {ECO:0000313|EMBL:GAF01397.1, ECO:0000313|Proteomes:UP000019402};
RN [1] {ECO:0000313|EMBL:GAF01397.1, ECO:0000313|Proteomes:UP000019402}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 21142 {ECO:0000313|EMBL:GAF01397.1,
RC ECO:0000313|Proteomes:UP000019402};
RA Starns D., Oshima K., Suda W., Iino T., Yuki M., Inoue J., Kitamura K.,
RA Iida T., Darby A., Hattori M., Ohkuma M.;
RT "Draft Genome Sequence of Cytophaga fermentans JCM 21142T, a Facultative
RT Anaerobe Isolated from Marine Mud.";
RL Genome Announc. 2:e00206-14(2014).
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000256|ARBA:ARBA00001964};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAF01397.1}.
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DR EMBL; BAMD01000001; GAF01397.1; -; Genomic_DNA.
DR RefSeq; WP_044211719.1; NZ_KI912107.1.
DR AlphaFoldDB; W7Y0C8; -.
DR STRING; 869213.GCA_000517085_04411; -.
DR eggNOG; COG0022; Bacteria.
DR eggNOG; COG1071; Bacteria.
DR OrthoDB; 9769337at2; -.
DR Proteomes; UP000019402; Unassembled WGS sequence.
DR GO; GO:0016624; F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor; IEA:InterPro.
DR CDD; cd02000; TPP_E1_PDC_ADC_BCADC; 1.
DR Gene3D; 3.40.50.920; -; 1.
DR Gene3D; 3.40.50.970; -; 2.
DR InterPro; IPR001017; DH_E1.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR009014; Transketo_C/PFOR_II.
DR InterPro; IPR005475; Transketolase-like_Pyr-bd.
DR InterPro; IPR033248; Transketolase_C.
DR PANTHER; PTHR42980:SF1; 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA, MITOCHONDRIAL; 1.
DR PANTHER; PTHR42980; 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED; 1.
DR Pfam; PF00676; E1_dh; 1.
DR Pfam; PF02779; Transket_pyr; 1.
DR Pfam; PF02780; Transketolase_C; 1.
DR SMART; SM00861; Transket_pyr; 1.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
DR SUPFAM; SSF52922; TK C-terminal domain-like; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Pyruvate {ECO:0000313|EMBL:GAF01397.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000019402}.
FT DOMAIN 472..646
FT /note="Transketolase-like pyrimidine-binding"
FT /evidence="ECO:0000259|SMART:SM00861"
FT COILED 323..353
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 807 AA; 90501 MW; 0CC58B9005BD4DCF CRC64;
MISNSGISFD EFKKEVLRDY RVGHMSRNMS ITGRKEVLSG KAKFGIFGDG KEIAQIAMAK
QFKKGDWRAG YYRDQTFMLA AGMTTPVEFF ASLYGETNTE RNPDNGGRSF NNHFGTRTIT
DTGEWKNIVD IKCTSSDISP TAGQMPRLIG LAYASKLYRS NPGLKQAKIF SRGGNEVAFG
TIGDASTSEG HFFETMNAAA VHQIPVAMSV WDDGFGISVP KKIQTTKESI SELLKGFEKG
ARDTTGIVIY KLKGWDYAGM CQAYEEGVAR CRKEHVPVLF HVEEVTQPVG HSTSGSHERY
KTEERLQWEK DFDCLVKMRE WIIERSLATA KELDELEKDA RQEVQEAKKE AWKQYTTTLK
EERDALLNLV ENRTCECSGK KNERIDAMAN GLRNELTLNR KAILSTARKI LRHICNSCNH
TGSLKNNLQD WIRDYRSKAH EMYNDRLYCE DEFAALKVPV VPPLYPKEIE SVPGREILRD
NFDALFAKVP ELVTFGEDTG VLGGVNQSME GLQKKYGSSR IWDEGIRETT IIGTGLGMAL
RGFRPIAEIQ YFDYLMYGLQ TMSDDLATLR YRTKGGQKAP MIVRTRGHRL EGIWHSGSPT
SMVINSIRGV YVCVPRDMTR AAGMYNTLVQ ADDPALVIEP LNGYRIREPK PSNIGEYNIP
LGIPEVLHVG QDATLVTYGS CVRIAQEAVQ QLGEIGISVE LIDVQTLLPF DIHGVILESV
KKTNRVVFFD EDVPGGTTAY MMQQVIEKGG GFNYLDSAPR TVTAKDHRPA FGTDGDYFSN
PSAEDVYEAI YDMMSEVNPQ KFPPIYS
//