ID W7Y8S3_9BACL Unreviewed; 303 AA.
AC W7Y8S3;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:GAF07345.1};
GN ORFNames=JCM16418_1356 {ECO:0000313|EMBL:GAF07345.1};
OS Paenibacillus pini JCM 16418.
OC Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
OX NCBI_TaxID=1236976 {ECO:0000313|EMBL:GAF07345.1, ECO:0000313|Proteomes:UP000019364};
RN [1] {ECO:0000313|EMBL:GAF07345.1, ECO:0000313|Proteomes:UP000019364}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 16418 {ECO:0000313|EMBL:GAF07345.1,
RC ECO:0000313|Proteomes:UP000019364};
RA Yuki M., Oshima K., Suda W., Oshida Y., Kitamura K., Iida Y., Hattori M.,
RA Ohkuma M.;
RT "Draft Genome Sequence of Paenibacillus pini JCM 16418T, Isolated from the
RT Rhizosphere of Pine Tree.";
RL Genome Announc. 2:e00210-14(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAF07345.1}.
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DR EMBL; BAVZ01000003; GAF07345.1; -; Genomic_DNA.
DR RefSeq; WP_036646985.1; NZ_BAZT01000003.1.
DR AlphaFoldDB; W7Y8S3; -.
DR STRING; 1236976.JCM16418_1356; -.
DR eggNOG; COG2378; Bacteria.
DR OrthoDB; 9815009at2; -.
DR Proteomes; UP000019364; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR001034; DeoR_HTH.
DR InterPro; IPR013196; HTH_11.
DR InterPro; IPR028349; PafC.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR026881; WYL_dom.
DR PANTHER; PTHR34580; -; 1.
DR PANTHER; PTHR34580:SF6; HTH DEOR-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF08279; HTH_11; 1.
DR Pfam; PF13280; WYL; 1.
DR PIRSF; PIRSF016838; PafC; 2.
DR SMART; SM00420; HTH_DEOR; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51000; HTH_DEOR_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000019364};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 3..62
FT /note="HTH deoR-type"
FT /evidence="ECO:0000259|PROSITE:PS51000"
SQ SEQUENCE 303 AA; 35394 MW; 56C2A1BF7BED3445 CRC64;
MDKVERLISI IMILLKKEVV STTEFSQLFN VSKRTILRDM ETLSLSNIPI YSVNGVKGGY
GIMDEYKVDK RLISSSDLQN ILTALGGLEQ ILRTEEVERT IKKIEAMVSP LSLNRSIQLS
FYDWEGRSEI LETLKTCQES ISKKRLVSFD YTDKDGAVTN RMVEPYELHF SESSWYLKGF
CLHRQGYRTF KLSRIDHITM DERAFHPRDD WSEQVHEANY LPEFVTIKAW ISPSIKDQII
ERYGRRSIED HSSGFLLATI YVPQNRMGFQ LLASFGTHLK VVEPKTYVED FRNYLYQMME
NYS
//