ID W8CMA2_ASPMA Unreviewed; 261 AA.
AC W8CMA2;
DT 14-MAY-2014, integrated into UniProtKB/TrEMBL.
DT 14-MAY-2014, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Phytochrome C {ECO:0000313|EMBL:AGH68095.1};
DE Flags: Fragment;
GN Name=phyC {ECO:0000313|EMBL:AGH68095.1};
OS Asparagus maritimus (Sea asparagus) (Asparagus scaber).
OG Plastid; Chloroplast {ECO:0000313|EMBL:AGH68095.1}.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae;
OC Asparagoideae; Asparagus.
OX NCBI_TaxID=59019 {ECO:0000313|EMBL:AGH68095.1};
RN [1] {ECO:0000313|EMBL:AGH68095.1}
RP NUCLEOTIDE SEQUENCE.
RA Xu Y.-L., He P., Zhang L., Dong S.-L., Li F.;
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AGH68095.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=26079131; DOI=10.1016/j.ympev.2015.06.002;
RA Norup M.F., Petersen G., Burrows S., Bouchenak-Khelladi Y.,
RA Leebens-Mack J., Pires J.C., Linder H.P., Seberg O.;
RT "Evolution of Asparagus L. (Asparagaceae): Out-of-South-Africa and multiple
RT origins of sexual dimorphism.";
RL Mol. Phylogenet. Evol. 92:25-44(2015).
CC -!- FUNCTION: Regulatory photoreceptor which exists in two forms that are
CC reversibly interconvertible by light: the Pr form that absorbs
CC maximally in the red region of the spectrum and the Pfr form that
CC absorbs maximally in the far-red region. Photoconversion of Pr to Pfr
CC induces an array of morphogenic responses, whereas reconversion of Pfr
CC to Pr cancels the induction of those responses. Pfr controls the
CC expression of a number of nuclear genes including those encoding the
CC small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B
CC binding protein, protochlorophyllide reductase, rRNA, etc. It also
CC controls the expression of its own gene(s) in a negative feedback
CC fashion. {ECO:0000256|ARBA:ARBA00002479}.
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; JX574055; AGH68095.1; -; Genomic_DNA.
DR AlphaFoldDB; W8CMA2; -.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-KW.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:UniProt.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chloroplast {ECO:0000313|EMBL:AGH68095.1};
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Plastid {ECO:0000313|EMBL:AGH68095.1};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..146
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AGH68095.1"
FT NON_TER 261
FT /evidence="ECO:0000313|EMBL:AGH68095.1"
SQ SEQUENCE 261 AA; 28881 MW; DCC08C8135499C54 CRC64;
AYKFHEDEHG EVIAECRRSD LDPYIGLHYP ATDIPQASRF LFMKSKVRMI CDCSAHPVKI
IQDKKLAQPL SLCGSTLRAP HGCHAQYMSN MGSVASLVMS VTINEDDDES GSDQKGRKLW
GLVVCHHTNP RFVPFPLRYA CEFLLQVFGI QLNKEVELAA QAREKHILRT QTVLCDMLLR
DAPIGIFTQT PNVMDIVKCD GAALYYKNQI WVLGTTPTEP QIRAISAWLL ECHDGSTGLS
TDSLMEAGYP GALALGDAVC G
//
