GenomeNet

Database: UniProt
Entry: W8EGA5_9VIBR
LinkDB: W8EGA5_9VIBR
Original site: W8EGA5_9VIBR 
ID   W8EGA5_9VIBR            Unreviewed;       190 AA.
AC   W8EGA5;
DT   14-MAY-2014, integrated into UniProtKB/TrEMBL.
DT   14-MAY-2014, sequence version 1.
DT   24-JAN-2024, entry version 27.
DE   RecName: Full=DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|ARBA:ARBA00012895};
DE            EC=5.6.2.2 {ECO:0000256|ARBA:ARBA00012895};
DE   Flags: Fragment;
GN   Name=gyrB {ECO:0000313|EMBL:AHJ89130.1};
OS   Vibrio sp. Vi_53.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Vibrio.
OX   NCBI_TaxID=1464722 {ECO:0000313|EMBL:AHJ89130.1};
RN   [1] {ECO:0000313|EMBL:AHJ89130.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Vi_53 {ECO:0000313|EMBL:AHJ89130.1};
RX   PubMed=24487545; DOI=10.1128/AEM.04133-13;
RA   Rahman M.S., Martino M.E., Cardazzo B., Facco P., Bordin P., Mioni R.,
RA   Novelli E., Fasolato L.;
RT   "Vibrio trends in the ecology of the venice lagoon.";
RL   Appl. Environ. Microbiol. 80:2372-2380(2014).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP-dependent breakage, passage and rejoining of double-
CC         stranded DNA.; EC=5.6.2.2; Evidence={ECO:0000256|ARBA:ARBA00000185};
CC   -!- SIMILARITY: Belongs to the type II topoisomerase GyrB family.
CC       {ECO:0000256|ARBA:ARBA00010708}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; KF899044; AHJ89130.1; -; Genomic_DNA.
DR   AlphaFoldDB; W8EGA5; -.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003918; F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity; IEA:UniProtKB-EC.
DR   GO; GO:0006265; P:DNA topological change; IEA:InterPro.
DR   CDD; cd00822; TopoII_Trans_DNA_gyrase; 1.
DR   Gene3D; 3.30.230.10; -; 1.
DR   Gene3D; 3.40.50.670; -; 1.
DR   InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR   InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR   InterPro; IPR001241; Topo_IIA.
DR   InterPro; IPR013760; Topo_IIA-like_dom_sf.
DR   InterPro; IPR000565; Topo_IIA_B.
DR   InterPro; IPR013759; Topo_IIA_B_C.
DR   InterPro; IPR013506; Topo_IIA_bsu_dom2.
DR   PANTHER; PTHR45866:SF1; DNA GYRASE SUBUNIT B, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR45866; DNA GYRASE/TOPOISOMERASE SUBUNIT B; 1.
DR   Pfam; PF00204; DNA_gyraseB; 1.
DR   PRINTS; PR01159; DNAGYRASEB.
DR   PRINTS; PR00418; TPI2FAMILY.
DR   SMART; SM00433; TOP2c; 1.
DR   SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR   SUPFAM; SSF56719; Type II DNA topoisomerase; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Isomerase {ECO:0000256|ARBA:ARBA00023235};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Topoisomerase {ECO:0000256|ARBA:ARBA00023029}.
FT   DOMAIN          4..151
FT                   /note="DNA topoisomerase type IIA subunit B"
FT                   /evidence="ECO:0000259|Pfam:PF00204"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:AHJ89130.1"
FT   NON_TER         190
FT                   /evidence="ECO:0000313|EMBL:AHJ89130.1"
SQ   SEQUENCE   190 AA;  20653 MW;  92A4B67CD68A26ED CRC64;
     FHFNSEREDG ITVEVAMQWN DGYQENIYCF TNNIPQRDGG AHLAGFRAAL TRTLNSFMDK
     EGFSKKAKTA TSGDDAREGL TAIVSVKVPD PKFSSQTKDK LVSSEVKSAV ESTMGEKLSE
     FLIENPGEAK TVCSKIIDAA RARDAARKAR EMTRRKGALD LAGLPGKLAD CQEKDPALSE
     LYIVEGDSAG
//
DBGET integrated database retrieval system