ID X0QHV7_9LACO Unreviewed; 363 AA.
AC X0QHV7;
DT 14-MAY-2014, integrated into UniProtKB/TrEMBL.
DT 14-MAY-2014, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE SubName: Full=Integrase core domain-containing protein {ECO:0000313|EMBL:KRM02878.1};
DE SubName: Full=Transposase, IS30 family {ECO:0000313|EMBL:GAF38190.1};
GN ORFNames=FD41_GL001179 {ECO:0000313|EMBL:KRM02878.1}, JCM14108_3312
GN {ECO:0000313|EMBL:GAF38190.1};
OS Lentilactobacillus farraginis DSM 18382 = JCM 14108.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lentilactobacillus.
OX NCBI_TaxID=1423743 {ECO:0000313|EMBL:GAF38190.1, ECO:0000313|Proteomes:UP000019488};
RN [1] {ECO:0000313|EMBL:GAF38190.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 14108 {ECO:0000313|EMBL:GAF38190.1};
RA Yuki M., Oshima K., Suda W., Kitahara M., Kitamura K., Iida T., Hattori M.,
RA Ohkuma M.;
RT "Draft Genome Sequences of Two Lactobacillus Strains, L. farraginis JCM
RT 14108T and L. composti JCM 14202T, Isolated from Compost of Distilled
RT Shochu Residue.";
RL Genome Announc. 2:e00257-14(2014).
RN [2] {ECO:0000313|EMBL:KRM02878.1, ECO:0000313|Proteomes:UP000051966}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 18382 {ECO:0000313|EMBL:KRM02878.1,
RC ECO:0000313|Proteomes:UP000051966};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAF38190.1}.
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DR EMBL; BAKI01000114; GAF38190.1; -; Genomic_DNA.
DR EMBL; AZFY01000134; KRM02878.1; -; Genomic_DNA.
DR AlphaFoldDB; X0QHV7; -.
DR PATRIC; fig|1423743.5.peg.1219; -.
DR eggNOG; COG2826; Bacteria.
DR Proteomes; UP000019488; Unassembled WGS sequence.
DR Proteomes; UP000051966; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR025246; IS30-like_HTH.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; NF033563; transpos_IS30; 1.
DR PANTHER; PTHR10948; TRANSPOSASE; 1.
DR PANTHER; PTHR10948:SF23; TRANSPOSASE INSI FOR INSERTION SEQUENCE ELEMENT IS30A-RELATED; 1.
DR Pfam; PF13936; HTH_38; 1.
DR Pfam; PF00665; rve; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
FT DOMAIN 201..363
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 363 AA; 41838 MW; F402C0214D89970D CRC64;
MKGHEDLFLL TSKLIKKASV FMTQNQNNMP RHYQQLQPSE RGKIETLNHQ HKTAHTIAKI
LHRSTSTVTR ELARGTTTQI DAQRHCYYQA YFAETGEAVY RQHRAHCHPQ GLLKRAAPFF
KNLTRALKAR PRIYSVDTYV AHFKQTYLGF VCPSVPTVYR YIDQGRLALR NHDLPKKLRR
RRKRPGRAHT RLNKKILGQS IENRPAVVQA RKALGHWEGD LVKAKRNDNE PALMTLTERV
SRLEILVKLP NYQAKTCRQA LQKTVDDYGP QYFKTITFDN GSEFAELSQI KGPTIYFAHP
YSPWERGTNE NLNGQLREFF PKGKSLASVN VIELQAAQDT LNHRPRKCLG YHYAAELLPG
LAD
//
