ID X5J8I3_9BACT Unreviewed; 476 AA.
AC X5J8I3;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:CDG50032.1};
DE EC=4.1.99.3 {ECO:0000313|EMBL:CDG50032.1};
GN Name=phr {ECO:0000313|EMBL:CDG50032.1};
GN ORFNames=CHV_d0039 {ECO:0000313|EMBL:CDG50032.1};
OS Cardinium endosymbiont cBtQ1 of Bemisia tabaci.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Amoebophilaceae;
OC Cardinium.
OX NCBI_TaxID=1354314 {ECO:0000313|EMBL:CDG50032.1, ECO:0000313|Proteomes:UP000024482};
RN [1] {ECO:0000313|EMBL:CDG50032.1, ECO:0000313|Proteomes:UP000024482}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cBtQ1 {ECO:0000313|Proteomes:UP000024482};
RX DOI=10.1093/gbe/evu077;
RA Santos-Garcia D., Rollat-Farnier P.A., Beitia F., Zchori-Fein E., Vavre F.,
RA Mouton L., Moya A., Latorre A., Silva F.J.;
RT "The genome of Cardinium cBtQ1 provides insights into genome reduction,
RT symbiont motility and its settlement in Bemisia tabaci.";
RL Genome Biol. Evol. Evol.0:0-0(2014).
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000256|PIRSR:PIRSR602081-1};
CC Note=Binds 1 FAD per subunit. {ECO:0000256|PIRSR:PIRSR602081-1};
CC -!- SIMILARITY: Belongs to the DNA photolyase family.
CC {ECO:0000256|RuleBase:RU004182}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDG50032.1}.
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DR EMBL; CBQZ010000004; CDG50032.1; -; Genomic_DNA.
DR RefSeq; WP_034577450.1; NZ_CBQZ010000004.1.
DR AlphaFoldDB; X5J8I3; -.
DR STRING; 1354314.CHV_d0039; -.
DR eggNOG; COG0415; Bacteria.
DR Proteomes; UP000024482; Unassembled WGS sequence.
DR GO; GO:0003904; F:deoxyribodipyrimidine photo-lyase activity; IEA:UniProtKB-EC.
DR Gene3D; 1.25.40.80; -; 1.
DR Gene3D; 1.10.579.10; DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3; 1.
DR Gene3D; 3.40.50.620; HUPs; 1.
DR InterPro; IPR036134; Crypto/Photolyase_FAD-like_sf.
DR InterPro; IPR036155; Crypto/Photolyase_N_sf.
DR InterPro; IPR005101; Cryptochr/Photolyase_FAD-bd.
DR InterPro; IPR002081; Cryptochrome/DNA_photolyase_1.
DR InterPro; IPR006050; DNA_photolyase_N.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR PANTHER; PTHR11455; CRYPTOCHROME; 1.
DR PANTHER; PTHR11455:SF9; CRYPTOCHROME-1; 1.
DR Pfam; PF00875; DNA_photolyase; 1.
DR Pfam; PF03441; FAD_binding_7; 1.
DR PRINTS; PR00147; DNAPHOTLYASE.
DR SUPFAM; SSF48173; Cryptochrome/photolyase FAD-binding domain; 1.
DR SUPFAM; SSF52425; Cryptochrome/photolyase, N-terminal domain; 1.
DR PROSITE; PS51645; PHR_CRY_ALPHA_BETA; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|RuleBase:RU004182};
KW FAD {ECO:0000256|ARBA:ARBA00022827, ECO:0000256|PIRSR:PIRSR602081-1};
KW Flavoprotein {ECO:0000256|ARBA:ARBA00022630, ECO:0000256|PIRSR:PIRSR602081-
KW 1}; Lyase {ECO:0000313|EMBL:CDG50032.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000024482}.
FT DOMAIN 3..132
FT /note="Photolyase/cryptochrome alpha/beta"
FT /evidence="ECO:0000259|PROSITE:PS51645"
FT BINDING 237
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000256|PIRSR:PIRSR602081-1"
FT BINDING 282
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000256|PIRSR:PIRSR602081-1"
FT BINDING 285..292
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000256|PIRSR:PIRSR602081-1"
FT SITE 317
FT /note="Electron transfer via tryptophanyl radical"
FT /evidence="ECO:0000256|PIRSR:PIRSR602081-2"
FT SITE 370
FT /note="Electron transfer via tryptophanyl radical"
FT /evidence="ECO:0000256|PIRSR:PIRSR602081-2"
FT SITE 393
FT /note="Electron transfer via tryptophanyl radical"
FT /evidence="ECO:0000256|PIRSR:PIRSR602081-2"
SQ SEQUENCE 476 AA; 55158 MW; 1C2E3337CB082DB1 CRC64;
MAQVAIVWLR RNLRLQDNKP FAAALRHFDK VLPIFIFDTT ILKQFPNPYD RRLSFLAHTL
CLLHDTLKML QGALSVFHGT PLEIIPKLVN HLKVEAIYAD EDYEPANIER DRAIQKVLAP
HCKLHLYCDH LLIKPGIILT QSNQPYKVYT PYMKAFRAYV VHQGVLAQNR LLIEYKYALE
GRLFTSSLPD GNSIDLNLGV EAVLKQIGYI YKKDGLWDPK NACNRLDGFL INQIDHYKAN
RDLLDLNGTS RCGPYLRFGL ISIRSCYRKA FALASNVGVT TWINELIWRE FYANILYHFP
NIIYEAFQEK YRNTIPWNSK QEDYDRFVCG QTGYPIVDAA IQQLLCEGWM HNRARMIVAS
FFSKNLLLDW SKGESFFAQH LMDYELASNV GGWQWSSACG VDAPPYFRVF NPYLQGKKFD
PDGQYVKKYL PSLQKVPGHI IHTVDFHTLH IDYPKPMVDY RLSRIRAIET LKKIGP
//
