ID X6LQM2_RETFI Unreviewed; 1017 AA.
AC X6LQM2;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ETO03045.1};
DE Flags: Fragment;
GN ORFNames=RFI_34365 {ECO:0000313|EMBL:ETO03045.1};
OS Reticulomyxa filosa.
OC Eukaryota; Sar; Rhizaria; Retaria; Foraminifera; Monothalamids;
OC Reticulomyxidae; Reticulomyxa.
OX NCBI_TaxID=46433 {ECO:0000313|EMBL:ETO03045.1, ECO:0000313|Proteomes:UP000023152};
RN [1] {ECO:0000313|EMBL:ETO03045.1, ECO:0000313|Proteomes:UP000023152}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24332546;
RA Glockner G., Hulsmann N., Schleicher M., Noegel A.A., Eichinger L.,
RA Gallinger C., Pawlowski J., Sierra R., Euteneuer U., Pillet L.,
RA Moustafa A., Platzer M., Groth M., Szafranski K., Schliwa M.;
RT "The Genome of the Foraminiferan Reticulomyxa filosa.";
RL Curr. Biol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETO03045.1}.
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DR EMBL; ASPP01034277; ETO03045.1; -; Genomic_DNA.
DR AlphaFoldDB; X6LQM2; -.
DR EnsemblProtists; ETO03045; ETO03045; RFI_34365.
DR OMA; NDYFRKN; -.
DR OrthoDB; 51115at2759; -.
DR Proteomes; UP000023152; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR006597; Sel1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45641:SF1; NEPHROCYSTIN-3; 1.
DR PANTHER; PTHR45641; TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870); 1.
DR Pfam; PF13424; TPR_12; 7.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00671; SEL1; 8.
DR SMART; SM00028; TPR; 16.
DR SUPFAM; SSF48452; TPR-like; 3.
DR PROSITE; PS50005; TPR; 15.
DR PROSITE; PS50293; TPR_REGION; 7.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000023152};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 333..350
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 352..385
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 390..423
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 432..465
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 474..507
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 516..549
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 554..587
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 596..629
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 638..671
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 680..713
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 718..751
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 760..793
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 802..835
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 844..877
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 886..919
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 928..961
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT COILED 199..322
FT /evidence="ECO:0000256|SAM:Coils"
FT NON_TER 1017
FT /evidence="ECO:0000313|EMBL:ETO03045.1"
SQ SEQUENCE 1017 AA; 118941 MW; D7EFBFE1C8827B6C CRC64;
MNTEEDEKKE EKVNTAVIPV SFDQSCFDKD WILQSNKKEQ INYFTCLICK QVANYPLEIT
CPEHKHMDEL LIVGKHCLQQ FFKKNNNTCP IQTHDGCQHR DMKQLLQINN LTVICPRQFQ
LDLETPGTGE EGKKLIRPTC NFKGNMKELI EHLRNSCPLQ LLTCWFRSFG CDHSCLKELL
EEHLALQKKY HFDLVIKHLE SLQQKIKYSQ EESTKLQAEN QTLKSEIELK VDKSNKEIHS
KNDEIQQLKD NIKLQLLKKN HEINTIQDQL RQEKIQHEHA LESLKINFTE KEKQNNELTE
LLKEKDKQID QLKEQSKNND NNLFKGYHNN CNVYLIFLVV AIILPLYNAI PVRWYTYFGD
YYHNNRQYDK AIEYYQNALD ILKINHKGTA LLYNDLGNSY YKNSQWDNAI ENYENALKHG
LSNSNLVRVN VANSYNNLGN FYYKKNQHDQ AITNYENALK YGLNDAKSTR INVADSYNNL
GDSYNNHKQY NQAIEHYEKA LKIRLDIFEA NHSDVARSYN SLGSSYYNNR QYDKAIGYYE
KALSIFKTNH KEIALLYNDL GNSYYNNDQW SNAIEHYENA LRRGLDNSKL IRVNVANSYN
NLGNFYYKKN QYDQAITNYE NALKYGLDDA KSTQINIANL CNDLGDSYNN HKQYDQAIEH
YEKALKIKLD IFGTNHSDIV RSYNSLGSSY YNNRQYDKAI EYYEKALNIF NTTHKVIALL
YNDLGQNYDS KQMHDKAIEH YEKALKIRLN IFGTNHSDVA WSYYKLGSSY NNNNQWDIAI
QHYQHALNNG FGDTKLIQIS IANSYNNLGE DYKNKKIYDK AIEYYEKALK IRLDIFGTNH
LDVAWSYHYL GSSYYSNHQP DKAIEYHEKA LKIRLDIFGT NHVNVADCYH NLGNPYLYKG
QYTKAIEYYE KALEIYLPII GTNHQCTANS YHNLGNACIG NGQYDKAIEH YKIVLKISKE
LFRDTDALIG YCNWNLGVAL EIKKETSTAL EYYKAAYKIF SKVLGESHTD TLKAKTK
//
