ID X6N7D8_RETFI Unreviewed; 1675 AA.
AC X6N7D8;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=WD-40 repeat protein {ECO:0000313|EMBL:ETO21926.1};
DE Flags: Fragment;
GN ORFNames=RFI_15279 {ECO:0000313|EMBL:ETO21926.1};
OS Reticulomyxa filosa.
OC Eukaryota; Sar; Rhizaria; Retaria; Foraminifera; Monothalamids;
OC Reticulomyxidae; Reticulomyxa.
OX NCBI_TaxID=46433 {ECO:0000313|EMBL:ETO21926.1, ECO:0000313|Proteomes:UP000023152};
RN [1] {ECO:0000313|EMBL:ETO21926.1, ECO:0000313|Proteomes:UP000023152}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24332546;
RA Glockner G., Hulsmann N., Schleicher M., Noegel A.A., Eichinger L.,
RA Gallinger C., Pawlowski J., Sierra R., Euteneuer U., Pillet L.,
RA Moustafa A., Platzer M., Groth M., Szafranski K., Schliwa M.;
RT "The Genome of the Foraminiferan Reticulomyxa filosa.";
RL Curr. Biol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETO21926.1}.
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DR EMBL; ASPP01011185; ETO21926.1; -; Genomic_DNA.
DR EnsemblProtists; ETO21926; ETO21926; RFI_15279.
DR OMA; FASDDQW; -.
DR OrthoDB; 2384510at2759; -.
DR Proteomes; UP000023152; Unassembled WGS sequence.
DR CDD; cd00200; WD40; 3.
DR Gene3D; 2.160.20.80; E3 ubiquitin-protein ligase SopA; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 6.
DR InterPro; IPR001646; 5peptide_repeat.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR007111; NACHT_NTPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19848:SF8; F-BOX/WD REPEAT-CONTAINING PROTEIN SEL-10; 1.
DR PANTHER; PTHR19848; WD40 REPEAT PROTEIN; 1.
DR Pfam; PF05729; NACHT; 1.
DR Pfam; PF00805; Pentapeptide; 1.
DR Pfam; PF00400; WD40; 14.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 14.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF141571; Pentapeptide repeat-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 3.
DR PROSITE; PS00678; WD_REPEATS_1; 12.
DR PROSITE; PS50082; WD_REPEATS_2; 14.
DR PROSITE; PS50294; WD_REPEATS_REGION; 14.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000023152};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 527..689
FT /note="NACHT"
FT /evidence="ECO:0000259|Pfam:PF05729"
FT REPEAT 1044..1085
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1086..1127
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1128..1169
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1170..1211
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1212..1253
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1254..1295
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1296..1337
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1338..1379
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1380..1421
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1422..1463
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1464..1505
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1506..1547
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1548..1589
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1590..1622
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ETO21926.1"
SQ SEQUENCE 1675 AA; 190871 MW; 17F1569E776A184B CRC64;
FFFYVYTYTL NAAKKKKIED QPSQVEHKTE EAQNHFVSVL IFFLFEAIEN ITKNPLQKAT
SLQKEEEKAQ IGDIKTGINL QGYCSNGDCL AAKAMLAVWV NIGFETLSLD LGKGYYNCPD
CRKQTVSSIV KVMFFNSEHS IRANDESIPV EDNHYQCLYT IKANTKYELK AKKIRQHAIS
LEDLRIRSEN AMNSNEIINL ITKLEKYEIT VVKPPNLKDN VRLLEKIQAD YGGDFNQAFD
IGRFTILCDN PTKLQTAVAV MKKAEEFNLI VSEDKDFFEK QSKTHHRFHN IKLYVPKYDV
YVEMQATLKN FTTLQGYSNI ENPKLSHLFY ELIRSWKPNK AEEELKQACD ETLTKINDII
CEWIEEKEII KITKRYQSHL DIGILYPPQL KTKIIEQKEE KEKEKIINNI IIDPSLKLAS
FVYEQLCTFI PMKIKGKAIY VILFEFYKKY IIGDKNPATC FEVATILQES QKQEIEEDAA
ISQALNLYIP LQANNYPYAE NDNKNDGFDC YQYVKEFVEN KTDQKSVMVL QGNSGSGKSL
FCRYLEETLW KDYSNHSSTF IPIYISLPKF YNHLHEIDII SEALQMKQIN KEIIDIIQKS
IPFIFILDGF DEVFDSYNKS NNHEMYFYDR LQLGQWNAKV ILTCRSNVLN KEDIKRTLMG
SNQNSNTLMV HLWPFSNTQM HSYIEKFVNT EQFNKTKDNW NAQQYHETLK KYPNLYKMVE
EPFLLRLILT VLPSLIQQHA VGSTISRAQV YEVFTNQWLD FHIQHISKKL TELRIQTYTN
KMRSAFQRYC QGLAFEMFLQ SNQVAVENET ENESDWTTTL PDPDVKMENK MAEEQERAST
NDSAKKRDIW EKYFRGEGLT KYALRRIGAN QYTFLHKSCQ EYFAAHKVIN EIISWKWSKV
DINAEVFQQT FAQQVQHFSI NKKLLNDENG IIRFIAERVH DKNPMYVNFK SRLLRIIEAS
KAYPVAIAAA NAATILNAAR VSLAYQDWSN VNISNAILDH AFLEGTDFSN ANLQNVSLLQ
AFLNKVNFQS ASMSDVLFGE YAYLKGHSHI ITAAKFSPDG LTIVSSSYDD SIRLWDIASA
KQIQKLEGHT GGINDVQFSS DGRTIVSCSN DQTIRLWDVA SGREMHKFQG HDHLVTAVQF
SPDGKIIASC SNDSTVRIWD IRSGQEIQKL EGHTRGTTRA QFSPDGRILV SSSWDETTRL
WDVKSGKELQ RLVGHSGPVA GAQFSPDGQQ VVSCSADCTI RIWDVASGRE VRKLEGHSNV
VAVAQFSPDG QNLVSGSWDK TIRLWEVSSG REIKTLEGHT DSVFGVQFSP DGCSVVSCSG
DQTIRLWDVV SGRENQRLDG HVDNVVAARF LPDNRSIISC SSDKTIRIWD IHSGRELQTL
EGHSAAVTSV GFSTDGLTII SSSEDKTIRL WSLLSGKEIQ RFEGHFRGIT AAQVSSNGRY
IVSGSEDKTV RIWDTKTASE IKKFEGHSDS VLGVQFSPDG RNVVSCSYDT TIRMWDVESG
REIRKFEGHT AGVTEVHFSS DNRTIVSCSC DKTIRLWNVP SGREAKKLEG HTDLVTGVKF
SADERLIISC SRDQTIRIWD IASGRELQKF EGHSAAVRTA EISRDGCSVL SSSDDKSIRL
WDRSLGTCKW QGGVQSCGLS MVGSLWKGVQ GLNDQQKLLV KQRGGAFNGV LWLHW
//