ID X6NGY0_RETFI Unreviewed; 1818 AA.
AC X6NGY0;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=NB-ARC domain-containing protein {ECO:0000313|EMBL:ETO25575.1};
GN ORFNames=RFI_11559 {ECO:0000313|EMBL:ETO25575.1};
OS Reticulomyxa filosa.
OC Eukaryota; Sar; Rhizaria; Retaria; Foraminifera; Monothalamids;
OC Reticulomyxidae; Reticulomyxa.
OX NCBI_TaxID=46433 {ECO:0000313|EMBL:ETO25575.1, ECO:0000313|Proteomes:UP000023152};
RN [1] {ECO:0000313|EMBL:ETO25575.1, ECO:0000313|Proteomes:UP000023152}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24332546;
RA Glockner G., Hulsmann N., Schleicher M., Noegel A.A., Eichinger L.,
RA Gallinger C., Pawlowski J., Sierra R., Euteneuer U., Pillet L.,
RA Moustafa A., Platzer M., Groth M., Szafranski K., Schliwa M.;
RT "The Genome of the Foraminiferan Reticulomyxa filosa.";
RL Curr. Biol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETO25575.1}.
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DR EMBL; ASPP01008414; ETO25575.1; -; Genomic_DNA.
DR EnsemblProtists; ETO25575; ETO25575; RFI_11559.
DR OrthoDB; 198243at2759; -.
DR Proteomes; UP000023152; Unassembled WGS sequence.
DR CDD; cd00200; WD40; 2.
DR Gene3D; 2.160.20.80; E3 ubiquitin-protein ligase SopA; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 7.
DR InterPro; IPR001646; 5peptide_repeat.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR007111; NACHT_NTPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR011047; Quinoprotein_ADH-like_supfam.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19879:SF1; CANNONBALL-RELATED; 1.
DR PANTHER; PTHR19879; TRANSCRIPTION INITIATION FACTOR TFIID; 1.
DR Pfam; PF05729; NACHT; 1.
DR Pfam; PF00805; Pentapeptide; 1.
DR Pfam; PF00400; WD40; 16.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 16.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF141571; Pentapeptide repeat-like; 1.
DR SUPFAM; SSF50998; Quinoprotein alcohol dehydrogenase-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
DR PROSITE; PS00678; WD_REPEATS_1; 9.
DR PROSITE; PS50082; WD_REPEATS_2; 16.
DR PROSITE; PS50294; WD_REPEATS_REGION; 14.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000023152};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 575..733
FT /note="NACHT"
FT /evidence="ECO:0000259|Pfam:PF05729"
FT REPEAT 1102..1143
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1144..1185
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1193..1224
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1225..1266
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1267..1308
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1309..1350
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1351..1392
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1393..1434
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1435..1476
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1477..1519
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1520..1561
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1562..1603
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1604..1645
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1646..1687
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1688..1729
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1730..1771
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 95..117
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 549..579
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1818 AA; 207472 MW; 7FC2493728FDF89E CRC64;
MTFCQKTKES THVFAHNKKE FGHINKERLV GGMHSENGQE KYATEMKMLK RLCSGTIDQD
ELEKQLEENN GSVALVVEKI ISKLINQNIE IPENDIDNKQ NDQKTDSSLK KEDEKAEIGE
TNPGINLQGY CVYNQSCLAS KANLPVWVNI GFADISFTSD KTSYCCPYCK QPTVTSIVKV
MFFNSEHSIR ANDDTAPVKS NNYQCFYIVK PGLTYELKAS KIRQHAISLE DLIARSENAM
ASVEIVNLVK ELERYSITVV KPSKVKDKAR LLEKIERDYK GNYNQVFDIG RFTILCNNPT
TLQTAVIVMK KAEQFNLIVS EDKDFFDKQS KTHHRFHNIK LYVPKHDVYI EMQATLKNFT
TLEGYTVIEN PKLSHLFYEL IRAWEPNVSS TQEQKLKQAS DKTLTKINDI ICEWIDEKGS
KKIAERYKTH SNIMILKPPQ LSNRTEEEIK KNISLKVAQF AYEQLCKFTP EGMKGKALYV
ILYDYYKKYI IGDKNLASYA DFLALLQKSR KQELEEDVAI SQALETYIPL QANNYPHMDG
EDGANEKTYD CHQHVLEFLQ EQSEEKQEKE QKRKVMIIQG KSGSGKSIFC RHLEKALWEA
TNLSDLKKDI PIYISLSKLY NKQNEKDIIL QALQCKHINK EIMDTIREKL SFVFIMDGFD
EIFDFYRTFD NVQYFYDRFN LNQWNAKIVI TCRSNVLHDD DINAALIDVN QNDTSMMYLW
PFTKQQMHSY IEKFAITRSK NNKKNKEKIW SSQQYEETLN NYPNLLKMIE EPFLLQLILT
VLPSLVKQYG ADSKISKAQV YEAFNEQWID IHVKNILSKL SELKIQTNPK KIKLAFQKYC
QDLGFEMFVQ GNQVATESDN IIQNQSNLIF NKVDPIIEIK IEEIDEKKLE IKTNEIDTLA
IKIQDIWEKY FNGDSIAKYL LRRVGDNKYQ FLHKSCQEYY ASQKIIFDII SWKPDTANID
YQQFQQQFEA HISKLSINFK LLNEELGIIQ FIAERIHDTN PKFVNLKSRL FRIIESSKTN
KYINIAAANA ITILNSANVN MHYQNWDNIK IPHAILDRAF LEGTSLNNAN LDHVSFVQAF
LNKTNFTNAS MASIYFGEYA YLEGYSTSIF GVQLSPDGTK IVSCLSDKTI RIWDASLGKQ
IQLLKGHSDR IKVAQFSPDS SKIASCSADN TIRIWDILSG QQLQKWEEHC GDIQFSYDSS
KIVSCSGDNM IRVWSVSSGK QIQLLNGHSS IVNAAQFSSD GSKIISCSND KTIRIWNVLS
GEQLQILEGH SDYVISVQFT ANASKIISYS LDQTIRIWNA SSGQQMFVLK GHSTPINLVR
VSPDGLKMLS CSQDSNIRIW DSLSGKQVQL LEGHSDWIKS AQFSPDSSRV VSGSSDKTIR
IWDVSSGKQL QMLEGHLGIV RGVEFFPRDL KILSYSGDKT IRIWDVALER KIQLTEGHLD
NVNEVQFSPD GSKIVSSSLD KTVRLWDVQS GRPIQVFEGH SSWVRGIRFS PDGSKIASFA
YFDKVIQMWH VASGKQFHRL EGHLKDVNGV QFSSDGTKIA SCSDDKTIRI WDMLSGKQLQ
VLEGHLDKVS GVQFSPDSSK IVSCSSDKTV RLWDVFSGKQ LGSFEKHKNS LTDTQFSPDG
SKIVSCSSDK TIRIWDVSSG KQLLLLEGHS DVIKGVRFSP NASQIVSCSQ DKTIRLWDAS
SGKQLRILEG HSEYIVDALF SSDGSKLISC SWDKTIRIWD VSSGKQVQLL EGHNGKIYGM
RLSQCGSKIV SCSEDRTIRL WSIDTSKTDN NVETNLAKCI WQVGVQSRGL SMKDSVWKNT
TGLTPQQKLL VEQRGGKY
//
