ID YJHI_ECOLI Reviewed; 262 AA.
AC P39360; Q2M616;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1995, sequence version 1.
DT 27-MAR-2024, entry version 154.
DE RecName: Full=Uncharacterized HTH-type transcriptional regulator YjhI;
GN Name=yjhI; OrderedLocusNames=b4299, JW4261;
OS Escherichia coli (strain K12).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=7610040; DOI=10.1093/nar/23.12.2105;
RA Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.;
RT "Analysis of the Escherichia coli genome VI: DNA sequence of the region
RT from 92.8 through 100 minutes.";
RL Nucleic Acids Res. 23:2105-2119(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
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DR EMBL; U14003; AAA97195.1; -; Genomic_DNA.
DR EMBL; U00096; AAC77255.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE78290.1; -; Genomic_DNA.
DR PIR; S56524; S56524.
DR RefSeq; NP_418719.1; NC_000913.3.
DR RefSeq; WP_000251798.1; NZ_SSUV01000012.1.
DR AlphaFoldDB; P39360; -.
DR SMR; P39360; -.
DR BioGRID; 4260971; 82.
DR BioGRID; 853340; 4.
DR IntAct; P39360; 9.
DR STRING; 511145.b4299; -.
DR PaxDb; 511145-b4299; -.
DR EnsemblBacteria; AAC77255; AAC77255; b4299.
DR GeneID; 949100; -.
DR KEGG; ecj:JW4261; -.
DR KEGG; eco:b4299; -.
DR PATRIC; fig|1411691.4.peg.2398; -.
DR EchoBASE; EB2439; -.
DR eggNOG; COG1414; Bacteria.
DR HOGENOM; CLU_062618_6_0_6; -.
DR InParanoid; P39360; -.
DR OMA; PEGPYEA; -.
DR OrthoDB; 9807558at2; -.
DR PhylomeDB; P39360; -.
DR BioCyc; EcoCyc:G7912-MONOMER; -.
DR PRO; PR:P39360; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; IBA:GO_Central.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF7; HTH-TYPE TRANSCRIPTIONAL REGULATOR XYNR-RELATED; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW DNA-binding; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..262
FT /note="Uncharacterized HTH-type transcriptional regulator
FT YjhI"
FT /id="PRO_0000201773"
FT DOMAIN 6..66
FT /note="HTH iclR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00393"
FT DOMAIN 81..251
FT /note="IclR-ED"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00394"
FT DNA_BIND 27..46
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00393"
SQ SEQUENCE 262 AA; 29877 MW; 5597EAC9E0B946C8 CRC64;
MVRKGCNSLV RAEKILTHIA WVGMASYMEL LNKFQYPKSS LLNLLNVMVD CGFLIKNKNG
YYSLGIKNYE LGCQALHRQN IFEVTKRPMQ ELSLKSGLVC HLGAMESISA IYLDKIESPD
SVPTSKSWIG KKLELHITAL GKALLAWKTR EELDYFLEAL TLTPHTRNTF TDKKLFLEEL
QKTRLRGWAI DNEESTYGAV CLSMPVFNMY NRVNYAISLS GDPVVYSGNK IDSYLELLRK
CAEQISYGLG YRNENEHLRK GN
//
