KEGG   Uncinocarpus reesii: UREG_01823
Entry
UREG_01823        CDS       T01132                                 
Name
(RefSeq) pre-mRNA splicing factor ATP-dependent RNA helicase prp16
  KO
K12815  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
Organism
ure  Uncinocarpus reesii
Pathway
ure03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    UREG_01823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ure03041]
    UREG_01823
Enzymes [BR:ure01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     UREG_01823
Spliceosome [BR:ure03041]
 Complex C
  Other components
   Step II factors
    UREG_01823
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C HA2_N DEAD
Other DBs
NCBI-GeneID: 8438460
NCBI-ProteinID: XP_002542307
UniProt: C4JJL6
AA seq 921 aa
MARGDSPKRRKLDSDRYESSSPQPGAPPRHVFQRRRKDDGGVSMPKGIHNGSATPRQHEF
DGPEPLVDDEDVIALDRDWYAGDELGHTFGDETHNPFGGADSSWADMQREAALSEKKNNR
RFNARAVQKQKDVDAWETNRMLTSGVAQRRDYDADFEDDEDSTRVHLLVHDLRPPFLDGR
TIFTKQLEPVPAVRDPQSDMAVFSRKGSKVVKERRQLRERQKQAQDATNVAGTALGNIMG
IKEDEGDSAAAIPGEEDHKGGSKFAKHLKKNDGASAFSKSKTLRDTNGNIFLHSHSETAI
KYMTDGVLLRESLVQPDLDKYSCIIMDEAHERALNTDVLMGLIKKVLARRRDLKLIVTSA
TMNAERFSKFYGGAPEFFIPGRTFPVDIQYSRSPCEDYVDSAVKQVLAIHVSQGAGDILV
FMTGQEDIEATCDLIHERLALLNDPPKISVLPIYSQMPADLQAKIFDKAPPGVRKVIVAT
NIAETSLTVDGIMYVVDCGFSKLKVYNPRMGMDTLQITPISQANASQRAGRAGRTGPGKA
YHLYTELAFKNEFYIQTIPEIQRTNLANTVLMLKSLGVKDLLDFDFMDPPPQDTITTSLF
DLWALGAIDNLGDLTAMGRRMSPFPMDPSLAKLLITASEEYECSEEMLTIVSMLSVPSVF
YRPKERQEESDAAREKFFVPESDHLTLLHVYSQWKANGYSDGWCVRHFLHPKALRRAKEI
REQLHDIMTVQKMTLTSCGTDWDIIRKCICSGYYHQAARVKGIGEYINLRTSVTVQLHPT
SALYGLGFLPDYVVYHELILTSKEYMSCVTSVDPRWLADLGGVFYSIKEKGYSARERRVT
EREFNRRMEIETQMAADRERAAEIANHEAEKEKLKRRQEVAVGSASVGARTAVRRPASAA
ATKAGGSVVRRPPVKRIGRGF
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggctcgtggagatagcccgaagcgccgcaagctcgattcagatcgatatgaatcttcg
tccccgcagcccggagcacccccaagacatgttttccaacggcggaggaaagatgacggc
ggcgtatccatgccaaaaggaatccacaatggttctgcaacccctcgacaacatgagttc
gatggccctgaaccccttgtcgatgacgaggatgttattgcgttagaccgagactggtat
gctggcgacgaattgggccatacctttggcgatgagacgcataatccgtttggaggggcg
gacagctcgtgggcggatatgcagcgagaagctgcactgtcagaaaagaaaaacaaccgt
cggttcaatgcgcgcgcagtacaaaagcaaaaagacgttgatgcctgggaaacgaatcgg
atgctgacgtccggtgtcgcgcagcggagggattacgatgctgattttgaggatgatgag
gattcgacacgcgtgcacttattggttcatgatttgaggcccccgtttttggatgggagg
acgattttcacgaagcagttggaacccgtgccggcagtgagagacccgcaaagcgatatg
gcggtgtttagtcggaagggtagcaaggttgtgaaggagagaaggcagctaagagagcgg
cagaagcaggcacaagatgctacgaacgttgctggaactgcgttgggcaacattatgggc
atcaaagaagatgagggggacagcgccgctgcaatcccaggggaagaggatcacaaagga
ggaagcaaattcgccaaacatttgaagaagaacgatggcgcgagcgccttcagtaagagc
aagacgctccgtgacacaaacgggaatatcttcctgcattcgcatagcgaaacagccatt
aaatatatgaccgatggcgtactcttacgagaatctttggtgcagccggatctcgataaa
tactcttgtataatcatggatgaagcccacgagcgggctttaaacactgatgtcctaatg
ggattaattaaaaaggttctagcccgtcgacgagatctgaagctgattgtaacgtccgcc
acaatgaatgcagaacggttctcgaaattctacggaggtgctcctgaattcttcattcct
ggacggacattcccagttgatattcagtactccagatcgccttgtgaagactacgttgac
agcgctgttaagcaggttcttgctattcatgtatcgcagggcgccggggatattctcgtg
tttatgacggggcaggaagacattgaagctacttgtgacctgatacacgaaaggcttgca
cttttgaatgatccgccgaaaattagtgtcttgccgatatacagccaaatgcccgcagac
cttcaagccaagatttttgataaggcgcctcccggcgtcagaaaagttattgtcgccacc
aatattgcggaaaccagtttgaccgttgacggtatcatgtatgttgttgattgtggtttt
tctaaattaaaagtttacaacccacgcatggggatggatactttgcaaatcacgccaatc
tcccaggccaacgcatcacagcgcgccggccgcgctggacgaacgggcccagggaaagca
taccatctttacaccgaacttgcattcaagaatgaattctatattcaaactatccctgag
atacaaagaaccaacttggctaatacggttctcatgctcaagtcattgggagtgaaggat
ttgctggattttgatttcatggatcctcctcctcaggacaccatcaccacctcgttattc
gatttatgggcattgggtgccattgataatcttggtgatctcacggccatgggccgccgg
atgagcccctttccaatggacccgtcgctagcgaaactgctcatcaccgcatcagaagag
tacgaatgcagtgaagaaatgcttacaatcgtctccatgctatcagtgccaagtgttttc
taccgcccgaaggaacggcaagaagaatccgacgccgcccgtgaaaagttttttgtaccc
gagtcagatcatctcacccttctgcacgtgtatagccaatggaaagcaaatggctattct
gatggctggtgcgtgcggcacttccttcacccgaaggcgttgcgacgagctaaagagatc
cgagagcaacttcatgatattatgacggtacaaaaaatgacgctcacgagttgtggcact
gattgggacattattcgaaagtgcatttgctctggatattaccaccaggctgccagggtc
aaaggaattggcgaatatatcaatttacggaccagtgtcacagtacaacttcatcctaca
agtgcactttatgggcttggcttcctcccggattacgtcgtatatcacgaattgattttg
acgagcaaagagtacatgtcttgcgtcacatccgtggaccctcgctggcttgccgatctg
ggtggtgtcttctactccatcaaagaaaagggatattccgcccgtgaacgccgcgtcaca
gaacgcgaattcaaccgtcgcatggagattgaaacgcagatggccgcggaccgtgaacga
gctgccgagatagcaaaccatgaagcggagaaagaaaaactgaagcggcgccaagaggtc
gccgttggttccgcgtcagttggtgcgaggaccgcagtgaggagacctgcgtctgcagca
gcaacgaaggccggtgggagtgtggtcaggagacctcctgttaagagaatcgggcgagga
ttctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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