KEGG   Verticillium alfalfae: VDBG_05694
Entry
VDBG_05694        CDS       T02227                                 
Name
(RefSeq) double-strand break repair protein mus-23
  KO
K10865  double-strand break repair protein MRE11
Organism
val  Verticillium alfalfae
Pathway
val03440  Homologous recombination
val03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    VDBG_05694
   03450 Non-homologous end-joining
    VDBG_05694
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:val03032]
    VDBG_05694
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_05694
DNA replication proteins [BR:val03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    VDBG_05694
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     VDBG_05694
    BRCA1-C complex
     VDBG_05694
   NHEJ (non-homologous end-joining)
    MRX complex
     VDBG_05694
SSDB
Motif
Pfam: Mre11_DNA_bind Metallophos Metallophos_2
Other DBs
NCBI-GeneID: 9531572
NCBI-ProteinID: XP_003004581
UniProt: C9SLL7
AA seq 443 aa
MSAMKERDPIRKDDSWRTFDEIMEMAKKEDVDMVLLGGDLFHDNKPSRKSMYQVMRTLRR
NCLGMKPCELEFLSDANEVFEGAFPHVNYEDPDINISIPVFSIHGNHDDPSGDGHFCSLD
LLQVAGLVNYFGRIAEADNIEAKPVLLQKGQTKLALYGLSNVRDERMFRTFRDHKVKWFR
PNVQQTDWFNLLTVHQNHHAHTATSYLPENVLPDFMDLVVWGHEHECLIDPSQNPETGFH
VMQPGSSVATSLVAGEAVPKHVAVVSITGKDFKIKKLPLKTVRPFVTKDIVLATDKRFKG
VDKMKDNRQELTKRLMKVVDEMIEQANADWLAIQDEGEDAEEAPPLPLIRLKVEYTAPEG
GQYDCENPQRFSNRFVGKVANTNDVVYFHRKKTTASRGKQTAELPEGIDENLGLDTVKVE
ALVQEFLAAQSLKILPQAPFAMQ
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgtcggctatgaaagagcgagacccgatccgcaaggacgacagttggaggacgtttgac
gagatcatggagatggcaaagaaggaagatgtcgacatggtcctcctgggaggcgacctc
ttccacgacaataaaccgtctcgaaagtccatgtaccaggtcatgcgcaccctccgaaga
aactgtctcggcatgaagccttgcgagctcgaattcctgagtgacgcaaacgaagtcttt
gaaggcgcgttcccccacgtcaactacgaagaccccgacatcaacatatccatccccgtc
ttctcgatccacggcaaccacgacgaccccagcggcgacggccacttctgctctctcgac
ctcttgcaggtcgccggcctagtcaactatttcggacgcatcgccgaggccgacaacatc
gaggcgaagccggtgctgttgcaaaaggggcagacgaaactggctctctacggcctcagc
aacgtccgcgacgagcgcatgttcaggacctttcgcgatcacaaggtcaagtggttccga
cctaatgttcaacagactgactggttcaacctcttgaccgtccaccagaaccatcacgcc
cacaccgccacatcctacctgcccgagaatgtactgcctgactttatggacctggtcgtc
tggggccacgagcacgaatgcctcatcgacccctcacagaatcccgaaacggggttccac
gtcatgcaaccaggctcttccgtggccacctccctggtcgctggagaggctgtgcccaag
cacgttgctgtcgtcagcatcacgggcaaggacttcaagatcaaaaaactgcctctgaag
acggtccgcccttttgtcaccaaggacattgtcttggccacggacaagagattcaagggc
gtggacaagatgaaggacaatcgccaagagctgacaaagcggctgatgaaggtcgtggac
gagatgatcgagcaggccaacgccgactggctcgccattcaggacgagggggaggatgcg
gaggaagctccgccgcttccactgattcgcctcaaagtcgagtacacagcacccgaaggc
ggccagtacgactgcgagaacccgcagcgcttctccaaccgctttgtcggcaaggtggcc
aataccaacgacgtcgtctacttccatcgcaaaaagacgacggcatcgcgaggcaaacag
acggccgaactgccagaaggcatcgatgagaatttgggcctcgatacggtcaaggtggaa
gcgctcgtgcaggagttcctcgctgcacagtcgctcaagattcttcctcaggcgcccttt
gcgatgcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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