KEGG   Verticillium alfalfae: VDBG_06744
Entry
VDBG_06744        CDS       T02227                                 
Name
(RefSeq) vacuolar protein sorting-associated protein
  KO
K07889  Ras-related protein Rab-5C
Organism
val  Verticillium alfalfae
Pathway
val04144  Endocytosis
val04145  Phagosome
val04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:val00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    VDBG_06744
   04145 Phagosome
    VDBG_06744
   04148 Efferocytosis
    VDBG_06744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:val04131]
    VDBG_06744
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:val04147]
    VDBG_06744
   04031 GTP-binding proteins [BR:val04031]
    VDBG_06744
Membrane trafficking [BR:val04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    VDBG_06744
 Endosome - Lysosome transport
    VDBG_06744
Exosome [BR:val04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   VDBG_06744
  Exosomal proteins of other body fluids (saliva and urine)
   VDBG_06744
  Exosomal proteins of colorectal cancer cells
   VDBG_06744
  Exosomal proteins of bladder cancer cells
   VDBG_06744
GTP-binding proteins [BR:val04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    VDBG_06744
SSDB
Motif
Pfam: Ras Roc Arf AAA_16
Other DBs
NCBI-GeneID: 9537308
NCBI-ProteinID: XP_003003182
UniProt: C9SPB9
AA seq 246 aa
MEGSGNSASKPSSSVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGGRRTPAPHAPQP
AVPLLTMTSHQPPSSHKSGTCRPGRSSLKIWDPAGQEPSPCWRPAETLGRRAAAPGSPGI
VIALVGNKLDLTNDGGAGSAGGLGDAGDDGADGEADGNDASGDARKVSTDEAKTYADEES
LLFFETSAKTGHNVADVFTAIANAIPETSLKSTRGPGAANAVSRGGEEQRVNLNQRDAAA
KDSCAC
NT seq 741 nt   +upstreamnt  +downstreamnt
atggagggatccggaaactctgcctctaagccgagcagcagcgtcaagctggtgctgctc
ggagaggccgccgttggcaagtcctcgctcgttctccgcttcgtcaacaacgactttcaa
gagaacaaggagcccacgatcggcggtaggagaacccccgcgccccatgcccctcaacct
gcagtgccgctgctgaccatgacctcgcatcagccgccttcctcacacaaaagtggcacc
tgccgaccaggacgatcaagtttgaagatttgggacccggcgggccaggaaccttcgcct
tgctggcggccagcggaaacactgggtcgccgagctgcagcgccaggctcgccgggcatc
gtcatcgccctcgtcggcaacaagctcgatctgaccaacgatggcggcgccggatcggcc
ggcggtcttggcgatgccggtgacgacggcgccgacggcgaggccgatggcaatgacgcc
agcggcgacgcgcgcaaggtctcgaccgacgaggccaagacgtacgccgacgaggagagc
ctgctgttcttcgagacgagcgccaagacgggccacaatgtcgccgacgtcttcacggcc
attgccaacgccatccccgagacgtcgctcaagagcacgagggggcccggcgccgccaac
gccgtcagccgaggcggcgaggagcagagggtcaacctcaaccagcgcgacgcggcggcc
aaggacagttgcgcctgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (43)   

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