KEGG   Verticillium alfalfae: VDBG_07075
Entry
VDBG_07075        CDS       T02227                                 
Name
(RefSeq) ATP-dependent RNA helicase DBP3
  KO
K14811  ATP-dependent RNA helicase DBP3 [EC:3.6.4.13]
Organism
val  Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:val00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:val03009]
    VDBG_07075
Ribosome biogenesis [BR:val03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    VDBG_07075
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25
Other DBs
NCBI-GeneID: 9527500
NCBI-ProteinID: XP_003002504
UniProt: C9SQ40
AA seq 571 aa
MGATKRLLAGSEKKKKKKKNSPSKKQKVKEPAEGDDEAAALKKQRKKEKKAAKAAKEAKE
GGGEDKDEKKKRKEEKREKKRLREEAEKAAAAGEDAPMADVDADAETKPKKEKKDKKEKK
DKKEKKVMSQNGAAVASASYTQSAALTALPQADIDAYLAEQSIVIGDDKSTNLRPVLAFD
QLPVTDLLAKSPFAAYTKPTPIQAASWPFTLSGRDAIGVAETGSGKTMAFALPLVESISK
MKKRCIKAVVVSPTRELAMQTHEQTAQLAAHLGLKSVCVYGGASKDEQRALLQRGADIIV
ATPGRLKDFMSDGTVDLSHSRFAVLDEADRMLDKGFEDDIKAILGAMPAREDRQTLMFTA
TWPASVRLLASSFMVDPVKITIGSGGKETASGSVELQANTRITQRVEVVDGRDKEQRLLQ
ILRQYQAGQGRHDRILVFCLYKKEATRVEGFLQQRGIHVCGIHGDLRQDQRTRSLEAFKS
GSTSVMVATDVAARGLDIPEVKLVVNVTFPLTIEDYVHRIGRTGRAGKTGEAITLFTVQD
KAHSGSYVFFFFSFLSSSALRIVMDISLTLL
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgggtgcgacgaagcgtctcctcgccgggagcgaaaaaaaaaaaaaaaaaaaaaaaaac
agtcccagcaagaagcagaaggtcaaggaacctgccgagggcgacgacgaggcggcggcg
ctgaagaagcagaggaagaaggagaagaaggcggccaaggcggccaaggaggccaaggag
ggcggcggcgaagacaaggacgagaagaagaagcgcaaggaggagaagcgcgagaagaag
cggctcagggaagaagcggagaaggctgccgccgctggcgaggatgcccccatggccgat
gtcgacgccgacgccgagacgaagcccaagaaggagaagaaggacaagaaggaaaagaag
gacaagaaggagaagaaggtcatgtcacagaacggcgccgctgtcgcgagcgcctcgtac
acacagtcggcggccctgacggcgctgccccaggccgacattgacgcctacttggccgag
cagtcgattgtcatcggcgatgacaagtcgaccaacctgcgtcccgtcctcgccttcgac
cagctgcccgtcaccgacctcctcgccaagtcgccgtttgccgcctacaccaagccgacg
cccatccaggcggcctcgtggccgtttacgctgtcgggtcgtgacgccattggcgtggcc
gagacggggtccggcaagaccatggctttcgcgctgccgctcgtcgagtcgatcagcaag
atgaagaagcgctgcatcaaggccgtcgtcgtgtcgccgacgcgcgagctcgccatgcag
acgcacgagcagacggcccagctggcggcccacctcggcctcaagagcgtgtgcgtctac
ggcggcgcctccaaggacgagcagcgcgcgctgctgcagcgcggcgccgacatcatcgtc
gcgacgccgggccgcctcaaggacttcatgtccgacggcaccgtcgacctgtcgcacagc
cggttcgccgtgctcgacgaggccgaccgcatgctcgacaagggcttcgaggacgacatc
aaggccatcctcggcgctatgccagcgcgcgaggaccgccagacgctcatgttcacggcg
acgtggcccgcgtcggtgcgcctgctcgcctcgagcttcatggtcgaccccgtcaagatc
accatcggctcgggcggcaaggagacggcgagcggctcggtcgagctgcaggccaacacg
cgcatcacgcagcgcgtcgaggtcgtcgacggccgcgacaaggagcagcgcctgctgcag
atcctgcgccagtaccaggccggccagggccgccacgaccgcatcctcgtcttctgcctc
tacaagaaggaggccacgcgcgtcgagggcttcctccagcagcgcggcatccacgtctgc
ggcatccacggcgacctgcgccaggaccagcgcacccgcagcctcgaggccttcaagtcc
ggctccacctcggtcatggtcgccaccgacgtcgccgcccgcggcctcgacattcccgag
gtcaagctcgtcgtcaacgtcaccttcccgctgaccattgaggactacgtccaccgcatc
ggccgcaccggacgcgccggcaagacgggcgaggccattaccctctttaccgtccaggac
aaggcccactctggctcgtacgtctttttttttttttcctttctttcttcctcagcacta
cggatagtcatggatatctcgctaaccctgctttag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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