KEGG   Verticillium albo-atrum: VDBG_07996Help
Entry
VDBG_07996        CDS       T02227                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
val  Verticillium albo-atrum
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:val00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    VDBG_07996
Enzymes [BR:val01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     VDBG_07996
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VDBG_07996
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
AA seq 390 aa AA seqDB search
MPEIAEVARCVHFLRHHLVGRTIAKATAPEDDKVFGKVGTSGPAFEKAVQGRKYPGWVHI
KGDKTAYTNYYKKMKPEEADLWPPKYWKFRLETEGTPKVEVAFTDPRRFGRVRLVDCPGD
DIRKHTPLVENGPDPVVDAAIFTEEYMRSKMTSRHVPIKALLLDQTHISGIGNWVADEVL
YQANVHPEQYCDDFSDREIKAIYEKVRYVCQTAVDKLGDSDEFPEDWLFKYRWGKGGKDA
VSKLPNGEKLAFITVGGRTSCYAPSRQKKTGRVVPSAKEEPIDAKLTAKTTTAKLKGRKT
VQEVESSDEDEKPPAKKQRVARAASKVKVEDDDGATETSPLKKLKKTAKPSKAALASSKP
RVKQETTRVEASTNEDDLGRRRSGRIRKQS
NT seq 1173 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaaatagctgaagtcgcgcggtgtgtgcatttcctccgccaccatcttgttggc
aggaccatcgccaaagctacggcccctgaagatgacaaagtcttcggcaaggttggcacc
agtgggccagccttcgaaaaggccgtccagggaagaaagtatccaggctgggtccacatc
aagggtgacaagacagcctacacaaattactacaagaagatgaaaccagaggaagcagac
ctctggccgccaaagtactggaaattccgcctcgagaccgagggcacccccaaggtcgaa
gtcgcctttaccgacccccgtcgcttcggccgcgtgcgcctcgtcgactgtcctggggac
gacatccgcaagcacacgcccctcgtggagaacggccccgaccctgtcgtcgacgccgcc
atcttcacagaagagtacatgcgctccaagatgacgtcgcggcacgttcccatcaaagcc
ctgctgctggaccagacgcacatcagcggcatcggaaactgggtggcggacgaggtgctg
taccaggccaatgtgcatcctgagcagtactgcgacgactttagcgaccgcgagatcaag
gccatctacgagaaggtgcggtacgtgtgtcagacggccgtggacaagctcggtgattcg
gatgagttccccgaagactggctgttcaagtatcgatggggcaagggcggcaaggacgcc
gtgagcaagcttccaaatggcgagaagctggctttcatcacggtcggcgggcgcacgagc
tgctacgcgccgagcaggcagaagaagacgggtcgcgtggtgccttcggccaaggaagag
ccgatagacgcaaagcttacagccaagacgacgacagccaaactcaagggcaggaagacc
gtccaagaagtcgagtcaagcgacgaggatgaaaaacctccagcgaagaagcagcgcgtg
gcaagagcggcttccaaggtcaaggtcgaagatgatgacggtgctacggagacatcaccc
ctgaagaagctgaagaagacagccaagccgagcaaggctgctctagcatcgtcaaagcca
agggtgaaacaagagaccacgcgggtcgaggcatcaacgaatgaagatgatctgggacga
aggagatcagggcgtatacggaaacaatcttga

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