KEGG   Verticillium alfalfae: VDBG_08292Help
Entry
VDBG_08292        CDS       T02227                                 

Definition
(RefSeq) replication factor-A protein
  KO
K10739  
replication factor A2
Organism
val  Verticillium alfalfae
Pathway
DNA replication
Nucleotide excision repair
Mismatch repair
Homologous recombination
Module
RPA complex
Brite
KEGG Orthology (KO) [BR:val00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    VDBG_08292
   03420 Nucleotide excision repair
    VDBG_08292
   03430 Mismatch repair
    VDBG_08292
   03440 Homologous recombination
    VDBG_08292
DNA replication proteins [BR:val03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    VDBG_08292
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     VDBG_08292
   MMR (mismatch exicision repair)
     VDBG_08292
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     VDBG_08292
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
UniProt: 
AA seq 181 aa AA seqDB search
MDGVAGGPGSGSGVDLDAYVRVWGRIKSFNGKRHVGAHFLRAVTDFNEVNYHLLESTYVH
LFFTKGPLGGAKAEDNGDGMFVDGGGHGNNTSNNNNASHATGQSSKVAQCTPMGQKMYNF
LVNAPGGNEGVHMNVIASGAGMSMRDVLGAADDLLGQGLVYTTIDDETWGHSRVFERVAV
G
NT seq 546 nt NT seq  +upstreamnt  +downstreamnt
atggacggcgtcgccggcggccccggctccggctccggcgtcgacctcgacgcctacgtc
cgcgtctgggggcgtatcaagtccttcaacggcaagaggcacgtcggcgcccactttctg
cgcgccgtcaccgacttcaacgaggtcaactaccacctgctcgagagcacctacgtccac
ctcttcttcaccaaggggcccctcggcggtgccaaggccgaggacaacggcgacggcatg
tttgtcgacggcggcggccacggcaacaacaccagcaacaacaacaacgcatcacacgcc
accggccagtcgagcaaggtcgcccagtgcacgcccatgggccagaagatgtacaacttc
ctcgtcaacgcgccgggcggcaacgagggcgtgcacatgaatgtcattgcgagcggcgcc
ggcatgagcatgcgcgacgtcctcggcgccgccgacgacctactcggccaggggctcgtg
tataccaccatcgacgatgagacgtggggccattctcgagtatttgagcgggtggcggtc
gggtga

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