KEGG   Variovorax sp. PMC12: C4F17_17765
Entry
C4F17_17765       CDS       T05380                                 
Symbol
tssL
Name
(GenBank) type VI secretion system protein TssL
  KO
K11892  type VI secretion system protein ImpK
Organism
vam  Variovorax sp. PMC12
Pathway
vam03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C4F17_17765 (tssL)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vam02044]
    C4F17_17765 (tssL)
Secretion system [BR:vam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C4F17_17765 (tssL)
SSDB
Motif
Pfam: DotU OmpA RskA INV_N
Other DBs
NCBI-ProteinID: AVQ82657
UniProt: A0A2P1VBW3
Position
1:complement(3842615..3843982)
AA seq 455 aa
MNGVNDMAVGAGGFVPPNPGGGGAADPGGMPAAQRGMGAQPESFTAWHDARRPHAGDTAL
AGNNPLVAAANPLLDLIPQIRATGHHPAPAQLREHLVDEVRRFETRAQQAGIAPEVIIGA
RYCLCTAVDEAAALTPWGGSIWSSQSLLVMFHNETWGGEKFFQLLSRLVQNPQQHLHLIE
LIYFCLVLGFEGRFRVIDNGRSQLETLKQRLLQIIRQTRGEIAVPLSPHWQDASAPVRRA
RNWLPVWAVGAVAAVLLLVAFALLTFNLAGTSDGAFAAVNAVRLPQTARAVVMPAPTPRL
QRFLEPEIRDGLLTVRDEADRSVVVLRGDGLFASGSDRVLDRYAPVLARVADALNAVEGN
VLISGFSDDQPIRSVRFPSNWQLSQARADAVKKMIATRLSKPERLRAEGRGDADPIAPND
SPANRARNRRVEVTLLVAPVAGVPAPAAQQPGGAR
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgaacggtgtgaacgacatggccgtcggcgcgggaggtttcgtgccgccgaatccaggg
ggtgggggcgctgcggacccgggcggcatgcccgcggcgcaacgcggcatgggcgcgcag
cccgagtcattcaccgcatggcacgacgcgcggcgtccgcatgcgggcgacacggcgctc
gcgggcaacaacccgctggtggcggccgccaatccattgctcgacctgattccgcagatc
cgcgcaaccggccatcaccccgcgccggcgcagttgcgcgagcacctggtcgacgaggtg
cgccgcttcgagacgcgcgcgcagcaggcgggcatcgcgcccgaggtgatcatcggcgcg
cgctactgcctgtgcacggcggtggacgaggccgccgcgctcacaccgtggggcggcagc
atctggtcgtcgcagagcctgctggtgatgttccacaacgaaacctggggcggcgagaaa
ttcttccagctgctgtcgcggctggtgcagaacccgcagcagcacctgcacctgatcgag
ctcatctacttctgcctggtgctgggcttcgaggggcgcttccgcgtcatcgacaacggt
cgctcgcagctcgaaacgctcaagcagcgcctgctgcagatcatccggcagacgcgcggc
gagatcgcggtgccgctgtcgccgcactggcaggacgcgagcgcgccggtgcgccgcgcg
cgcaactggctgccggtgtgggccgtgggcgcggtggcggcggtgctgctgctggtggcg
ttcgcgctgctcacgttcaacctggcgggcacgtccgacggcgccttcgcggccgtcaac
gcagtgcggctgccgcagaccgcgcgcgccgtggtcatgcccgcgcccacgccgcgcctg
cagcgcttcctggagcccgaaatccgcgacggcctgctcacggtgcgcgacgaggccgac
cgcagcgtggtggtgctgcgcggcgacggcctgttcgcatcgggctccgaccgcgtgctc
gaccgctatgcgccggtgctcgcgcgcgtggccgatgcgctcaacgccgtcgaaggcaat
gtgctcatcagcggcttcagcgacgaccagccgatccgcagcgtgcgctttccgtcgaac
tggcaactctcgcaggcccgcgccgacgcggtgaaaaagatgatcgccacgcgcctttcg
aagcccgagcgcctgcgcgccgaaggccgcggcgacgccgaccccatcgcgcccaacgac
tcgccggccaaccgcgcgcgcaaccgtcgcgtcgaggtcacgctgctggtggcgccggtg
gcaggcgtacccgcgcctgcggcacaacagccgggaggagcccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system