KEGG   Vibrio anguillarum 775: VAA_02459Help
Entry
VAA_02459         CDS       T01536                                 

Definition
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
van  Vibrio anguillarum 775
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:van00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    VAA_02459
Enzymes [BR:van01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     VAA_02459
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VAA_02459
DNA repair and recombination proteins [BR:van03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VAA_02459
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
I:410362..411171
Genome map
AA seq 269 aa AA seqDB search
MPELPEVEVSKMGISPHLVGQTIQQLTFRTPKLRWAIPQELKQLEGQVIRNIARRAKYLL
IETDIGSAIVHLGMSGSLRVLECDFPAGKHDHVDLRLTNGKVLRYHDPRRFGAWLWCEQG
ASHSVLSNIGPEPLTDDFDADYIVQKANNKRIAVKQFIMENKVVVGVGNIYASESLFNAR
ILPTRPAHSLTLTEWNCLVREIKSVLATAIQQGGTTLKDFAQADGKPGYFAQELNVYGKA
QQPCPACGQAIEALKIGQRNTFFCSACQK
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttacccgaagttgaagtaagtaaaatggggattagcccgcatctagttgga
caaacgatccagcaactgacatttcgcacgccaaaattacgttgggccatccctcaagag
ctgaaacagttagaagggcaagtgatccgcaatattgcccgccgggccaaatatttattg
atagagaccgatattggcagtgcgattgttcacttgggaatgtcaggttcattgcgagta
ttggagtgtgattttccggcaggtaagcatgatcacgttgatctgcgattaaccaatggc
aaggtactgcgctaccacgatcctcgtcgatttggcgcttggctatggtgcgaacaagga
gcaagccactcggtgttgagtaatatcggtcctgagccattaaccgatgattttgatgca
gattatattgtgcaaaaagcgaacaataaacgtatcgctgttaagcaatttattatggaa
aataaagtagtggttggcgtaggcaatatctacgcgagtgaatcactgtttaatgcgcga
attctccccactcggcccgctcattcgctgacactgactgagtggaattgcctcgtgcga
gaaattaaatcagtcttagcaacggcgattcaacaaggtggcacaaccttaaaagatttt
gcacaagcggatggcaaaccgggctattttgctcaagagcttaatgtgtatggcaaagcg
cagcagccttgcccagcgtgtgggcaagcgattgaagcgctgaaaattggtcagcgtaac
acctttttctgctctgcttgccaaaaataa

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