KEGG   Vibrio anguillarum 775: VAA_1806Help
Entry
VAA_1806          CDS       T01536                                 

Definition
ATP-dependent DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
van  Vibrio anguillarum 775
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:van00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    VAA_1806
   03420 Nucleotide excision repair
    VAA_1806
   03430 Mismatch repair
    VAA_1806
   03450 Non-homologous end-joining
    VAA_1806
Enzymes [BR:van01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     VAA_1806
DNA repair and recombination proteins [BR:van03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      VAA_1806
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
I:1747831..1748697
Genome map
AA seq 288 aa AA seqDB search
MIEPDGMQLKLSLLSIALLNTIPVTATENFQMFIPVTAANSYQHGIDVAEYWKSEKLDGI
RAIWNGQYLHTRNGNKINAPAWFTAPLPNKALEGELWAGRGQFHHVQQTVLDTIPTDEAW
QSIRFMLFDMPEAIGDYQKRYRNLIHLSSLMNAPHITYIEHSLIHSEKELLGYLDNVSDG
QGEGVMLRKINAHYQAGRSNDLLKLKKHQDAEATVIGYKLGSGKYQGMMGSVLVRLENGV
EFYIGSGFSDEIRNNPPKIGSIITFRFNDLTAEGKPRFARFMRERPAI
NT seq 867 nt NT seq  +upstreamnt  +downstreamnt
ttgatcgagcctgacggcatgcaactgaaactatcgctactctccatcgctttattgaac
acaattcctgtcactgcaacggaaaactttcagatgtttattccggtcacagcagccaac
agttaccaacatggaattgatgttgctgagtactggaaaagtgaaaaactggatggaatt
cgcgccatctggaatggacaatatcttcatacgcgtaatggtaataagataaatgcgcct
gcttggtttactgcaccattacctaataaagcattagaaggagagctttgggctggacga
ggtcaatttcatcacgttcaacaaacggtattggataccataccaaccgatgaagcgtgg
caaagcatccgctttatgctgtttgatatgcccgaagcgatcggtgactaccaaaagcga
taccgcaatctcatccacttatcctcactcatgaatgctccgcacattacctatattgaa
cattcactaattcactcagaaaaagagctgcttgggtatttagacaacgtaagtgatggg
cagggtgaaggggtgatgctgcgaaaaattaatgcccattaccaagccggccgcagtaac
gatttacttaagcttaaaaaacaccaagatgctgaagctacggtcattggttataaactg
ggttctggcaaatatcaaggtatgatgggatcagtgctagtgcgcttagaaaacggtgtt
gagttctatatcggcagcggtttttctgatgagatcagaaataatccgccaaagatcgga
tccattattacttttcgttttaatgatctcactgcagaagggaaaccaagatttgcacgt
tttatgagagaaaggccagcaatataa

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