KEGG   Variovorax paradoxus S110: Vapar_1421Help
Entry
Vapar_1421        CDS       T00916                                 

Gene name
leuD
Definition
isopropylmalate isomerase small subunit
Orthology
K01704  
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
Organism
vap  Variovorax paradoxus S110
Pathway
Valine, leucine and isoleucine biosynthesis
C5-Branched dibasic acid metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
2-Oxocarboxylic acid metabolism
Biosynthesis of amino acids
Module
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:vap00001]
 Metabolism
  Overview
   01210 2-Oxocarboxylic acid metabolism
    Vapar_1421 (leuD)
   01230 Biosynthesis of amino acids
    Vapar_1421 (leuD)
  Carbohydrate metabolism
   00660 C5-Branched dibasic acid metabolism
    Vapar_1421 (leuD)
  Amino acid metabolism
   00290 Valine, leucine and isoleucine biosynthesis
    Vapar_1421 (leuD)
Enzymes [BR:vap01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.33  3-isopropylmalate dehydratase
     Vapar_1421 (leuD)
    4.2.1.35  (R)-2-methylmalate dehydratase
     Vapar_1421 (leuD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1:complement(1544611..1545261)
Genome map
AA seq 216 aa AA seqDB search
MQKFTVHKGLVAPMDRENVDTDAIIPKQFLKSIKRTGFGQNLFDEWRYLDAGFPGQDPQS
RKPNPDFVLNQPRYAGASILLARKNFGCGSSREHAPWALDQYGFRAIIAPSYADIFFNNS
FKNGLLPIVLPEAQVAQLFDETFAFPGYTLTIDLERQVVVKPDGGEFAFDVQAFRKYCLI
NGLDDIGLTLRHKDKIKAFEAERLAQKPWLAHTMIS
NT seq 651 nt NT seq  +upstreamnt  +downstreamnt
atgcagaaattcaccgtgcacaagggcctcgtggccccgatggaccgcgagaacgtcgac
accgacgcgatcattccgaagcagttcctcaagtcgatcaagcgcaccggcttcggccag
aacctgttcgacgaatggcgctacctggacgccggctttccgggccaggatccgcaaagc
cgcaagccgaaccccgacttcgtgctgaaccagccgcgctatgccggcgcctcgatcctc
ttggcgcgcaagaatttcggctgcggctcgtcgcgcgagcatgcgccttgggcgctcgac
cagtacggcttccgcgcgatcatcgcgccgagctatgccgacatcttcttcaacaacagc
ttcaagaacggcctgctgccgatcgtgctgcccgaagcgcaggtggcgcagctgttcgac
gagaccttcgcctttcccggctacacgctcaccatcgacctggagcgccaggtggtcgtg
aagcccgatggcggcgagttcgcgttcgacgtgcaggccttccgcaagtactgcctgatc
aacgggctggacgacatcggcctcacgctgcgccacaaggacaagatcaaggccttcgag
gccgagcggctggcgcagaagccctggctcgcgcacacgatgatctcgtga

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