KEGG   Variovorax paradoxus S110: Vapar_1870
Entry
Vapar_1870        CDS       T00916                                 
Name
(GenBank) threonyl-tRNA synthetase
  KO
K01868  threonyl-tRNA synthetase [EC:6.1.1.3]
Organism
vap  Variovorax paradoxus S110
Pathway
vap00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:vap00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Vapar_1870
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vap01007]
    Vapar_1870
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vap03016]
    Vapar_1870
Enzymes [BR:vap01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.3  threonine---tRNA ligase
     Vapar_1870
Amino acid related enzymes [BR:vap01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   Vapar_1870
Transfer RNA biogenesis [BR:vap03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Vapar_1870
 Prokaryotic type
    Vapar_1870
SSDB
Motif
Pfam: tRNA-synt_2b HGTP_anticodon tRNA_SAD TGS LytR_C
Other DBs
NCBI-ProteinID: ACS18520
UniProt: C5CUU2
Position
1:2002279..2004186
AA seq 635 aa
MIQITLPDNSRREFPGPVSVAEVAQSIGPGLAKMTVAGKVDGKLVDASDVIDHDARLQII
TPRDDEGLEIIRHSTAHLVGHAVKQLYPTAKMVIGPVIEEGFYYDISYERPFTPEDMAAI
EARMRELIAQDYDVVKKMTPRAEVIEVFKSRGEDYKLRLVEDMPDEQAMGLYYHQEYVDM
CRGPHVPNTRFLKVFKLTKLAGAYWRGDAKNEQLQRIYGTAWADKKQLDQYIQRIEEAEK
RDHRKLGKELDLFHIDEVAPGVVFWHPKGWALWQAVEQYMRGIYRDTGYWEVKGPQILDK
SLWEKTGHWQNYRDNMFTTESEKREYALKPMNCPGHVLIFKSDLRSYRDLPLRYGEFGQC
HRNEPSGALHGIMRVRGFTQDDGHIFCTEDQILEECVAYTAQLQKVYADFGFTEILYKVA
TRPDNRVGSDELWDKAEHAVMEALRRSGVDFIISPGDGAFYGPKIEYTLKDALGRQWQCG
TMQVDFNTAERLGGEYVTETSGRAHPVMLHRAIVGSLERFIGMLIEHHAGALPAWLAPVQ
VAVLNISEGQADYAASVAKTLQNQGLRVQLDLHNEKITYKIRKHSLQKLPYILVVGDKER
EAGAVAVRARGNQDLGAMSLESFVQRLVQDVADKR
NT seq 1908 nt   +upstreamnt  +downstreamnt
atgatccagatcacgcttcccgacaactcgcgccgcgagttccccggcccggtttcagtg
gccgaagttgcccagtccatcggacccgggctcgccaagatgacggtggccggcaaggtc
gacggcaagctcgtcgatgccagcgacgtcatcgaccatgacgccaggctccagatcatc
acgcccagggacgacgagggcctggagatcatccgccactcgacggcccacctggtcggc
cacgccgtgaagcagctctacccgacggccaagatggtcatcggcccggtgatcgaggag
ggcttctactacgacatctcctacgagcgccccttcacgcccgaggacatggccgccatc
gaggcgcgcatgcgcgagctcattgcgcaggactacgacgtggtcaagaagatgacgccg
cgcgccgaggtcatcgaggtcttcaagtcgcgcggcgaggactacaagctgcgcctggtc
gaggacatgcccgacgagcaggccatgggcctgtactaccaccaggaatacgtcgacatg
tgccgcggcccgcacgtgccgaacacgcgcttcctgaaggtcttcaagctcacgaagctc
gccggcgcctactggcgcggcgacgccaagaacgagcagctgcagcgcatctacggcacg
gcctgggccgacaagaagcagctcgaccagtacatccagcgcatcgaggaagccgagaag
cgcgaccaccgcaagctgggcaaggagctggacctgttccacatcgacgaagtggcgccc
ggcgtggtgttctggcaccccaagggctgggccctgtggcaggcggtggagcagtacatg
cgcggcatctaccgcgacacaggctactgggaagtgaagggcccgcagatcctcgacaag
agcctgtgggagaaaacgggccactggcagaactaccgcgacaacatgttcacgacggag
tcggaaaagcgcgaatacgcgctcaagccgatgaactgcccgggccacgtgctcatcttc
aagagcgacctgcgcagctaccgcgacctgccgctgcgctacggcgagttcggccagtgc
caccgcaacgagcccagcggcgcgctgcacggcatcatgcgcgtgcgcggcttcacgcag
gacgacggccacatcttctgcacggaggaccagatcctcgaagaatgcgtggcctacacg
gcgcagctgcagaaggtctacgccgacttcggcttcacggaaatcctctacaaggtggcc
acgcgccccgacaaccgcgtgggctccgacgagctctgggacaaggccgagcacgcggtg
atggaggcgctgcgccgttcgggcgtcgacttcatcatctcgcccggcgacggtgccttc
tacggccccaagatcgaatacacgctgaaggacgcgctgggccgccagtggcagtgcggc
acgatgcaggtcgacttcaacacggccgagcgcctgggcggcgagtacgtcacggaaacg
agcggccgcgcgcaccccgtcatgctgcaccgcgccatcgtcggcagcctggagcgcttc
atcggcatgctgatcgaacaccatgccggcgcgctgcccgcatggctcgctccggtgcag
gtggcggtgctcaacatcagcgaaggccaggccgactacgccgcttcagtggcgaaaacg
ctgcagaatcaagggcttagggtccagctggatctgcacaacgagaagattacgtataaa
atacgcaagcattcgttgcaaaagcttccctacatccttgtcgtaggcgacaaagagaga
gaagctggtgccgtcgcagtgcgcgcccggggcaatcaagacctcggtgcaatgtccctc
gaatcgttcgtgcaacggctcgtccaggatgttgctgacaagcgttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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