KEGG   Variovorax paradoxus S110: Vapar_1982
Entry
Vapar_1982        CDS       T00916                                 
Name
(GenBank) glycogen debranching enzyme GlgX
  KO
K01214  isoamylase [EC:3.2.1.68]
Organism
vap  Variovorax paradoxus S110
Pathway
vap00500  Starch and sucrose metabolism
vap01100  Metabolic pathways
vap01110  Biosynthesis of secondary metabolites
Module
vap_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:vap00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    Vapar_1982
Enzymes [BR:vap01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.68  isoamylase
     Vapar_1982
SSDB
Motif
Pfam: CBM_48 Alpha-amylase Isoamylase_C ISOA1-3_C NRN1 Glyco_hydro_70 DUF5696
Other DBs
NCBI-ProteinID: ACS18628
UniProt: C5CVH9
Position
1:2123527..2125692
AA seq 721 aa
MTRSSQRNPISAVWPGRPYPRGANWDGEGVNFALFSQHAQGVDLCLFDDKGRHEIQRIPI
RERTDGVWHCYLPEARPGQAYGYRVHGPYKPEEGHRFNPHKLLVDPYAKDLVGELRWGDA
LYGYTVGSKREDLSFDRRDSAPLVPKGRVLEPAFTWGDDRRPSVPWQDMVIYELHVRGFT
MRHPDVPPELRGTYGGLCCAPVVDYLKRLGVTTIELLPVHSFLNDRHLAEKGLQNYWGYN
SLAYFAPETRYSASGKVKEFKTMVKTLHSAGIEVILDVVYNHTCEGNQLGPTLSMRGVDN
ASYYIVNADNRRYYDDFTGCGNTVNLEHPHALQLVMDSLRYWAEEMHVDGFRFDLASALA
REAGKVENLGGFFDAIRQDPTLNRVKLIAEPWDLGHGGYQVGNFPLGWAEWNDRYRDGMR
GFWKGDPGVIGEVGKRLTGSEDLYGWSGKRPNASINFITAHDGFTLDDLVSYNDKHNEAN
GEDNRDGSNHNISWNCGAEGPTEDPEIAALRERQKRNLLATLLLSQGVPMLLAGDERGHT
QNGNNNAYCQDNDISWLDWTPTPERQALITFVERTIALRRAHPSFRRRSFFAGKPSEAES
VTDVVWLRPDGAEMRPEDWSDANARCLAMYMSGGGIADRGPRGEALHDDDFLVLFNAHHD
EIPFTLPPAPYGAWRLLLDTASGTPPPATEDVAALAPAWSEPAYPLQCRSLVVLSRPDVR
P
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgacacgcagcagccaacgcaatccgatctcggccgtctggccggggcgcccctatccg
cggggcgccaactgggacggggagggcgtgaacttcgcgcttttttcccagcacgcacaa
ggggtggacctgtgcctcttcgacgacaagggccgccacgaaatccagcgcatcccgatc
cgggagcgcaccgacggcgtatggcactgctacctgcccgaagcccgcccgggccaggcc
tacggctaccgcgtgcacggcccctacaagcccgaggagggccaccgcttcaacccgcac
aagctgctggtcgatccctacgcaaaagacctggtgggcgaactgcgctggggcgatgcg
ctctacggctacacggtcggcagcaagcgcgaagacctctcgttcgaccgccgcgacagc
gcgccgctggtgcccaagggccgcgtgctggagccggccttcacctggggcgacgaccgc
cggccctcggtgccctggcaggacatggtgatctacgagctgcacgtgcgcggcttcacc
atgcgccaccccgacgtgccgcccgagctgcgcggcacctacggcggcctgtgctgcgcg
cccgtggtcgactacctcaagcgcctgggcgtgaccaccatcgagctgctgccggtgcac
agcttcctcaacgaccggcacctggcggagaagggcctgcagaactactggggctacaac
tcgctggcctacttcgcccccgagacgcgctacagcgcctcgggcaaggtgaaggagttc
aagaccatggtgaagacgctgcactcggccggcatcgaggtgatcctggacgtggtctac
aaccacacctgcgaaggcaaccagctcgggcccaccctctcgatgcgcggcgtggacaac
gcctcctactacatcgtcaacgccgacaaccggcgctactacgacgacttcaccggctgc
ggcaacaccgtcaacctggagcatccgcatgcgctgcagctggtgatggattcgctgcgc
tactgggccgaggaaatgcacgtggacggcttccgcttcgacctggcctcggcgctcgcg
cgcgaggccggcaaggtcgagaacctgggcggcttcttcgacgccatccgccaggacccg
acgctcaaccgcgtcaagctcatcgccgagccctgggacctgggccacggcggctaccag
gtgggcaacttcccgctcggctgggccgaatggaacgaccgctaccgcgacggcatgcgc
ggtttctggaagggcgacccgggcgtgatcggcgaggtcggcaagcggctcaccggctcg
gaagacctgtacggctggtcgggcaagcggcccaacgcgagcatcaacttcatcaccgcg
cacgacggcttcacgctcgacgacctggtctcctacaacgacaagcacaacgaggccaac
ggcgaggacaaccgcgacggcagcaaccacaacatctcctggaactgcggcgccgaaggg
ccgacggaggaccccgagatcgccgcgctgcgcgagcgccagaagcgcaacctgctggcc
acgctgctgctgtcgcaaggcgtgccgatgctgctggccggcgacgagcgcggccacacg
cagaacggcaacaacaacgcctactgccaggacaacgacatcagctggctcgactggacg
cccacgcccgagcggcaggcgctgatcaccttcgtggagcgcaccatcgcgctcaggcgc
gcccacccctcgttccggcgccgcagcttctttgccggcaagccctcggaggccgagagc
gtgaccgacgtggtctggctgcggcccgacggcgccgagatgcgccccgaggactggagc
gacgccaacgcgcgctgcctggcgatgtacatgtccggcggcggcattgccgaccgcggg
ccgcgcggcgaggcgctgcacgacgatgattttctggtgctgttcaacgcgcaccacgac
gagatcccgttcaccctgccgcccgctccctatggcgcgtggcggctgctgctcgacacc
gccagcggcaccccgccgcccgccaccgaggacgtggccgcgctcgcgcccgcctggtcc
gagcccgcctatccgctgcagtgccgctcgctagtggtgctgagccggccggacgtgcgg
ccatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

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